Template-based Modeling Results for YCJN_ECOLI

Submitted Primary Sequence

>Length 430
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
CHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCHHHHHHHEEECCCEEEEEEEEEEEEEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEECCCCCEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
4310111000000000000104344432010100101133312200130022025313202010110323101210100042220010000012001001322013332112112311121013100320102222000000000100000000300240213203103100200230243232200000112311100100000001131200123120102122012002102200222111223122012002201000001000001001331333200000123433222111000000002424213001200200121310110022122110111220121121322310210020022012302313211221232022002100110011002201123220220032014302310443
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKSKIVLLSALVSCALISGCKEENKTNVSIEFMHSSVEQERQAVISKLIARFEKENPGITVKQVPVEEDAYNTKVITLSRSGSLPEVIETSHDYAKVMDKEQLIDRKAVATVISNVGEGAFYDGVLRIVRTEDGSAWTGVPVSAWIGGIWYRKDVLAKAGLEEPKNWQQLLDVAQKLNDPANKKYGIALPTAESVLTEQSFSQFALSNQANVFNAEGKITLDTPEMMQALTYYRDLTANTMPGSNDIMEVKDAFMNGTAPMAIYSTYILPAVIKEGDPKNVGFVVPTEKNSAVYGMLTSLTITAGQKTEETEAAEKFVTFMEQADNIADWVMMSPGAALPVNKAVVTTATWKDNDVIKALGELPNQLIGELPNIQVFGAVGDKNFTRMGDVTGSGVVSSMVHNVTVGKADLSTTLQASQKKLDELIEQH
1	MUSTER	3k01A	0.173	0.888	2.581	threading_1	----------------------AMVELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDGTPALD--DGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTG-ATGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFGNLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK-AVERPWIAEGNAL-------------FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
2	SPARKS	3jzja	0.164	0.881	4.474	threading_2	-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLD--GTPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKT-GATGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK---------AVERPWIAEGNAL-----FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
3	PROSPECT2	3jzjA	0.164	0.881	4.115	threading_3	-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYL--APLDGTPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDD----PYWFLPYLYGEGGDLVEKNKTVTVDDEAGVRAYRVIKDLVDSKADASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK---------AVERPWIAEGNALFEP-----IRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
4	PPA-I	3k01A	0.181	0.888	3.267	threading_4	----------------------AMVELSGTVTFWDTSNEA-EKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDG--TPALDDGSDHLPQAAASTRYE--GKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDDP----YWFLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKADASDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDK-AVERPWIAEGNAL-------------FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
5	HHPRED-l	3uor_A	0.168	0.874	2.445	threading_5	---------------------------KTTVRFWAMGK---EAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARKIVDPADYFPGVWDTNLVDG--TLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEFE----QQLSFALQQDDRLLDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKVTQSNVWYEFFNGYYAFYLSGPWNVREFKRQPEGNWGTAPLPGPNGL-GAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAI--IGDLPPRRSTWKLPSLANDALAHAFGDQL-------ERVKA-----TPKV--LEWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAK-
6	HHPRED-g	3uor_A	0.172	0.877	2.040	threading_6	---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMQPYVARKIVDPADYFPGVWDTNLVD--GTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEFE----QQLSFALQQDDRLLDHDNYGNFRGAGFRKALGFYDNMYQQGWAPKETQSNVWYEFFNGYYAFYLSGPWNVREFKRQPEGNWGTAPLPGPNGL-GAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLER-VKATPKVL--------EWERI-----VQEMRLVTERVVRGGQSHDAAVQELDQRVDEILARW
7	SP3	3jzja	0.172	0.881	4.625	threading_7	-------------------------ELSGTVTFWDT-SNEAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSAPDVMRTEVAWVADFASIGYLAPLDG--TPALDDGSDHLPQAAASTRY--EGKTYAVPQVIDTLALFYNKELLTKAGVEVPGSVAELKTAAAEITEKTGA-TGLYLRGDDPYW----FLPYLYGEGGDLVDEKKTVTVDDEAGVRAYRVIKDLVDSKAAISDGWNNMQNAFKSGKVAMMVNGPWAIEDVKAGARFKDLGVAPVPAGSAGQGSPQGGWNLSVYAGSKNLDASYAFVKYMSSAKVQQQTTEK--LSLLPTRTSVYEVPSVADNEMVKFFKPAVDKAV-ERPWI--------AEGNAL-----FEPIRLQMANVLSGETSPDEAAANTGDAYRKLLKDY
8	SAM-T99	1eu8A	0.209	0.891	3.514	threading_8	--------------------------EEGKIVFAVGG-APNEIEYWKGVIAEFEKKYPGVTVELKRQATEQRRLDLVNALRGKSSPDVFLMDVAWLGQFIAGWLEPLDDYVQKDNY-DLSVFFQSVINLADKQGGK-LYALPVYIDAGLLYYRKDLLEKYGYSPPETWQELVEMAQKIQETNPNFWGFVWQGKQYEGLVCDFVEYVYSNGGSLG-EDGKPTLNKPENVEALQFMVDLIKYKISPEMTEEPVRLMFQQGNAAFERNWPYAWGLHNADDVKGKVGVALPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKGFAMNL--GWNPGRVDVYDDPAVVSSPHLKELRAVFENAVPRPIV--------------PYYPQLSEIIQKYVNSALAGKISPQEALDKAQKEAEELVKQ-
9	MUSTER	3uorA	0.175	0.879	2.503	threading_9	---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMPYVARSKIVDPADYFPGVWDTNLV--DGTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNE----FEQQLSFALQQDDRLLRDHNYGNFRGAGFRKALGFYDNMYQQGWAPETQVSNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLE-RVKATPKVL-------------EWERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKR
10	SPARKS	3uora	0.175	0.879	4.367	threading_10	---------------------------KTTVRFWAM---GKEAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGNTWLPEFALLDTLEPMPYVARSKIVDPADYFPGVWDTNLV--DGTLYGVPWYVDTRLLFYRKDLLREAGYSMPKTWAEMEQVMAAIKRKGPDRYAILMPLNEF----EQQLSFALQQDDRLLRDHDYGNFRGAGFRKALGFYDNMYQQGWAPKVSETNVWYEFFNGYYAFYLSGPWNVREFKLRQPPGMWGTAPLPGPNGLGAGIAGGSSLVIFKSSQHKDASWKLIEYLSQPQVQARFHAII--GDLPPRRSTWKLPSLANDALAHAFGDQLE-RVKATPKVLE-------------WERIVQEMRLVTERVVRGGQSHDAAVQELDQRVDEILAKR

Predicted Tertiary Structure


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TM-score=0.806 to 2nvuB SCOP code=c.111.1.2	TM-score=0.813 to 2nvuB SCOP code=c.111.1.2	TM-score=0.847 to 1eu8A SCOP code=c.94.1.1	TM-score=0.848 to 1eu8A SCOP code=c.94.1.1	TM-score=0.811 to 2nvuB SCOP code=c.111.1.2