Template-based Modeling Results for YCIQ_ECOLI

Submitted Primary Sequence

>Length 631
MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
CCHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHEECCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEECCCEEECCCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCCCEEEEEEEEECCCEEECCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
5511110001000000000012132231121310023010202024312020211010103233131000010111112342321211020000222223221202233220000002432212422110101010320011221000000100133122302202010201422333221000000331322331201230102023223432010002013112222222322210121022101100000000000001100124334223232231321133110000200032212120000000100231101022234432201111332224332201311110021014422202021322320330032013001333432111221101100000000000011110000000100000000010000000001001123333011120000000000000000000000001000101010000000000000000000002211320121021021011001122010221223322013001100000010101220022003002211311302221000000000000211110022111100110111122223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAGKFRCILLLIAGLFVSSLSYAENTEIPSYEEGISLFDVEATLQPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEPWHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPFEIYKTRFSLQFSNIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVLYRWPHALLSNASAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVDVIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQSDKNQQILIRVNEGATRNNAVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSSFYRSDTFLQWGGLAILAVILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFARDDDKPCVNRVIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFTAVCLTGYLTGMGYIFLPKFTQTGQQRYAHGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISANLGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAGGGGGGGW
1	SPARKS	1hs6a	0.084	0.846	1.513	threading_1	-----------------PEIVDTCSLASPASVCRTKHLHLRCSVDTRRTLTGTAALTVQSQEDNLR---SLVLDTK-----------DLTIEKVVINGQEVKYALGERQSGSPMEISLPIALSKNQEIVIEISFETSSALQWLKEHPYLFSQCQAIHQDTPKLTYTAEVSVPKEMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-----------------PYVWGQYDLLVLPPSFPPCLTFVTPTLLAGDKSLSNVIAHEISHSWT--------GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGE-----------KFRHFNALGGWGELQNSVKT--FGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVL-----NQVDWNAWLYSPGLLTNACIALSQRWITADLKDLSSHQLNEFLAQTLQLGHIKRMQEVYNFNAINN----SEIRFRWLRLCIQSKW-EDAIPLALKMATEQGRMKDLAAFDKSHDQSMHPVTAMLGKDLKVD------------------
2	PROSPECT2	1hs6a	0.082	0.832	1.925	threading_2	PE-----------------IVDTCSLASPASVCRTKHLHLRCSVFTRRTLTGTAALTVQSQEDNLRSLVL--------------DTKDLTIEKVVINGQEVKYALGERQSGSPMEISLPIALSKNQEIVIEISFETSPKSSTSGKEHPYLFSQCQAIHPSVKLTYTAEVSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGGPYVWGQYDLLVLPPSFPYGGMELAGDKSLSNVIARHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEYLEQLLGG--------------PEIFLGFLKAYVEKFSYKSITTDDWKDF--LYSYFKDKVDVLNQVDWNAWLYLTNACIALSQRWITAKEDDLNSFNATDLKDLSSHQLNEFLAQTLQRAPLPLGHIKRMQEVYNFNAINNSEIRFRWLRLCIQSKW-----EDAIPLALKMATEQGRMKFTRPLFKDLAAFDKSHDQAVRTYQEHKA-----SMHPVTAMLVGKDLK-------------------------------------------------VD
3	HHPRED-l	2gtq_A	0.137	0.808	1.042	threading_3	--------------------TVHYLKDYQTPAYHILKTDLHFDINEPQ-TVVKSRLTVEPQRVG--EPLVLD---------G-----SAKLLSVKINGAAADYVLE--GETLTIA------GVPSERFTVEVETEILPAEGLYASGGNLFTQKITFYIDRPDV-STTTIVADKK--RYP--VLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSRNVKIEFYTTEADKENKRTATDTEYFHNWTGNRLKEGLTVRDQEFSGDRASRAFPAGPTAHPVRP-ASYEE-NNYTAEVVLYFQRQAVTCDDFRAA-ADANQAGTPEAEGRLKNN--IPVKVGLLN-RNGEAVAFTEALLLTSLLRGFAPVHLNYPYSD-D-------DLLLLLAHD-----SDAFTRWEAAQTLYRR-----------------------------AVAANLATLSDGVELPKHEKLLAAVEK------------------VISDDLLDN-AFKALLLGVPSEAELWDGAENLDTLAVHFLPKWH--ELNRQAAKQENQSYEYSPEAARTLRNVCRAFVLRADPAHIETVAEKYGLSAVNGSDTRNQFALV-DKYFALVGSSRRSTLQRSLIGSFSRNHAEDGSGYR-
4	SP3	1hs6a	0.096	0.878	1.315	threading_4	-----------------PEIVDTCSLASPASVCRTKHLHLRCSVDTRRTLTGTAALTVQSQEDNLR---SLVLDTKD-----------LTIEKVVINGQEVKYALGERQKGSPMEISLPIALSKNQEIVIEISFETSSALQWLQTSGKEHPYLFSQCQDTPKLTYTAEVSVPKELVALMSAIRDGE-TPDPEDPSRKIY---KFIQKVPIPCYLIALVVGA---LESRQIGPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGGPYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKSLSNVIAHEISH-------------SWTGNLVTNKTWDHFWLNEGHTVYLERHI-------CGRLFGEKFRHFNALGGWGELQNSVKTFGETH-PFTKLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVL-----NQVDWNAWLYSPGLLTNACIALSQRWITADLKDLSSHQLNEFLAQTLQLGHIKRMQEVYNFNAINN----SEIRFRWLRLCIQSKWEDAIPLALKMATE-------QGRMKFTRPLFKDLAAFDKSHDQAVSMHPVTAMLVGKDLKVD--
5	SPARKS	3q43a	0.093	0.922	1.224	threading_5	-------------------PKIHYRKDYKPSGFIINQVTLNINIHDQ-ETIVRSVLDMDISKHNVGEDLVFDG-------------VGLKINEISINNKKLVEGEEYTYDNEFLTIFSKF--VPKSKFAFSSEVIIHPELYKSKNIIVSQCEATGFFIDRPMAKYDVTVTADKEKYPVLNGDKVNEFEIPGGRHGARFNDPPSATYITKYTKKKVELYVFSEEKLASKKNSIDTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRPESYVSMENFYTSEVMRMYLTNTATCEDFNYAMEQAYKMKKVSFKYNDAEKKQYSIHVDENQKPENGKEMISQTTL--ELTKESDTFVFNNIAVKPIPSLFRYIEDQLTDEERILLLKSDAFVRYNSCTNIYMKQI--LMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHSLPQDRYIINFVLDTDVLADTKEYIYKQIGDKL------NDVYYKMFKSLEAKADDLTYFNHVDFDQMNMRTLRNTLLSLLSKAQLNEIIEHSK-SPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDSRSDRKDIYEILKKLENEVLKDSKNAVYL-PFTNNLRRFHDIS--GKGY
6	PROSPECT2	1z1wA	0.085	0.933	1.919	threading_6	ME--------------------------------VEKYDLTLDFDIQKR-TFNGTETITADAGDAVGLQINWM---KVNGRDTAFTYDGQTVRAPGDSQPQKIEISSDSLSGIYYAGRENGMIPAYKAVFAITVVIDKDYDAMPPKRIEKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKDIRSGIPYALPKMHLISVPEFGAGAAITFREIYMDIAENSAVTVKRNSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIKGISKYLNDHKAEGSDLWTAIEDVSGKPPVPVNIKKKDGVERILLEDEASIEADGLI------KINADSAGFYRVLYDDATFSDVMGHYRDLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRMLTHAFDDDARAFCRSRMQFLTGKQDENLKIALGRVSRLYVMVDESYAEEMSKLFKDFDSAEPEMRSSIATAYALVTGDLKGLLEKFRSVDRDEDRVRIISAFGKLKSNTDLSTVIKKQDMISFFSSALETLPGREFIFANLDRIIRLVIRYFTGNRTASRTVEMMIPVIGLDHPDAEDIVRNIGSKNISMVERIRQTAVK
7	SP3	2gtqa	0.093	0.971	1.078	threading_7	PQTVVKSRLTVPLVLDGSAKLLSVKINGAAADYVLEGETLTIAGVPSERFTVEVETEILPAEN-KSLGLYASGGNLFTQCEPEDVSKFTTTIVADKKRYPNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGAVTEDYFTTSGRNVKIEFYTTEADFGLEYDLDIFVVAVGDFNGAENKGLNIFNTKFVLADSRTATDTDFEGIESVVGH---EYFHNWTGNRVTCRDWFQLDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRPASYEENNFYTTVYEKGAEVVRYHTQAVTCDDFRAAALDQFALGTLEAEGRLKNNIFELTVKQTVPPTPDTDKQPI-PVKVGLLNRNGEAVAFDYQGKRATEAVL-----LLTEAEQTFLLEGVTEAVV--PSLLRVHLNYPYSDDDLLLLLAHAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDNAFKALEAELPLRYHQAREALLDTLAVFLPKWHELNRQAAKQEYSPEAAGWRTLRNVCRAFVLRADPAHIETVAEKYGEAQNTHEWGILSAVNGNEDTRNRLLAQFADKFSDDALVDK---YFALV---GSSRRSDTLQQKFSLENIGSFSRAEDGSGY
8	SPARKS	3t8va	0.093	0.919	1.223	threading_8	-------------------PKIHYRKDYKPSGFIINQVTLNINIHDQ-ETIVRSVLDMDISKHNVGEDLVFDG-------------VGLKINEISINNKKLVEGEEYTYDNEFLTIFSKF--VPKSKFAFSSEVIIHPELYKSKNIIVSQCEATGFFIDRPMAKYDVTVTADKEIPGGRHGARFNDPPLKPCYLFAVVAGDLSATYITKYTKKKVELYVFSEEKLASKKNSIDTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRPESYVSMANFYTSEVMRMYLTNTATCEDFNYAMEQAYKMKKVSFKYNDAEKKQYSIHVKEKKPPENGKEMISQTTL--ELTKESDTFVFNNIAVKPIPSLFRYIEDQLTDEERILLLKSDAFVRYNSCTNIYMKQI--LMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLEDPHSLPQDRYIINFVLDTDVLADTKEYIYKQIGDKL------NDVYYKMFKSLEAKADDLTYFNHVDFDQMNMRTLRNTLLSLLSKAQLNEIIEHSK-SPYPSNWLTSLSVSAYFDKYFELYDKTYKLSKDDSDRKDIY--EILKKLENEVLKDSKNAVYL-PFTNNLRRFHDIS--GKGY
9	PROSPECT2	1ih7a	0.074	0.899	1.734	threading_9	MKEFYLTV------------------------EQIGDSIFERYIDSNGRERTREVSLFAHCPESQATKYFDIYGKPCTEIKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITH----YDSIDDRFYVFDLLNSP----YGNVEEWSIEIAAKLQEQGGDEVIIYMPFDNEQQKTPVILTGWNVESFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLNVGKLKYDGPISKLRESNHQRYISYNIIDVYRVLQIDAKR------------------QFINLSLDMGYYAKIQIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPIPNRYKYSLYPSIIRQVNISPETIAGTFKVALAAQRNGEIIKEALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERKVNEYLDKIIDKVGESKFRDTNHWVDFL-------------DKFARERMEPAIDRGFREMCEYMNNKQHLPKAVQKALKECI-RRMLQEGEESLQEYFKEFEKEFRQLNASVSSANNIAKYDVGGFPGPKCPLREGNPFGDKCIAWPSGTEITF
10	SP3	3g06a	0.108	0.881	1.051	threading_10	PAEESRGRAAVVQKMRAC---LNNGNAVLNVGEGLTT------LPDCLPAHITT---LVIPDNNLTS-----LPALP-----------PELRTLEVSGNQLTSLPVLPPGLLELSIFSNPTHLPALPSGLCKLWIFGNQLTSLPV-------LPPGLQELSVSDNQLA-SLPALPS-ELCKLWAYNNQLTSLPMLPSGLQE--LSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGRLTSLPVLPSELKELMVSGNRLTSLPMLPSGLLSL--SVYPESLIHLSSETLEGNPLSERTLQALRE----ITSAPGYSGPIIR--FDMAGAETRAL---HLAAADWLVPADRWHMFGQEDNADAFSLFLDRLSETENFIKDAGFKAQISSWLAQLAEDEALRANTFAMATEATSSCEDRVTFFLHQMKNVQLVHNAEKGQYDNDLAALVATGREMFRLGKLEQIAREKVLALVDEIEVWLAYQNKLKKSLGLTSVTSEMRFFDVSGVTAEKSEFREWIGPLHRVLERKAPERVNAL--REKQISDYEETYRMLSDTELRPSGTDAERTIGARAMESAKKTFLDGLRPL-VE-------EMLGSYLNV---------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.807 to 1z8lA SCOP code=a.48.2.1	TM-score=0.821 to 1h19A SCOP code=a.118.1.7	TM-score=0.754 to 1h19A SCOP code=a.118.1.7	TM-score=0.462 to 1h19A SCOP code=a.118.1.7	TM-score=0.867 to 1h19A SCOP code=a.118.1.7