Template-based Modeling Results for YCHE_ECOLI

Submitted Primary Sequence

>Length 215
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
54220100110010000000000000000000000232222111200110000000000000000100021010213002000000000000010113213333343332322233210000000210001000000000023132111000000000000000000020021003104310020012000000000001000100220022115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN
1	PROSPECT2	1pw4A2	0.085	0.930	1.170	threading_1	VLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK----SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGN-----------PTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMKRRHEQLLQELVP
2	PPA-I	1pw4A2	0.090	0.926	1.036	threading_2	LPNKLLWYIAIANVFVYLLRYG-ILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFR----GNRGATGVFFMTLVTIATIVYWMNPA-----------GNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQE
3	PROSPECT2	1xm9A	0.121	1.000	1.161	threading_3	GICKLVDLQAAAGALRNLVETRRQNGIREAVSLLRRTGNAEIQKQLTGKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLNCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLGASLLSNMSRHPLLHRVMGNQVFPEVTREDILSSACYTVRNLMASQPQLAKQYFS
4	PROSPECT2	1oyzA	0.084	0.995	1.153	threading_4	NDDELFRLSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRR-DIGAFILGQIKICKKCEDNVFNILNNALNDKSACVRATAIESTAQRCVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELIEAAGELGDKTLLPVLTSAIDKLKS
5	PROSPECT2	2of3A	0.084	1.000	1.142	threading_5	AELLLSDNEDKKQRHISQLQTLLGNQAKVSLMSQLFHKDFKQHLAALDSLVRLARSLLSNSDLLLKWCTLRFFETNPAALIKVLELCKVIVELIRDTETPMSQEEVSGEAKDNMRTSVRDIVNVLSDVVGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGISPLKSLSVEKTVDVNVRNAAINVLVACFKFEGDQMDKSLVEERIKRTGV
6	PROSPECT2	1wa5C1	0.114	0.898	1.137	threading_6	MSDLETVAKFLAESERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKNVELIKKEIVPLMISLPNNLQVQIGEAISSIALSDLASRLSNDDMVT--------------------NKGVLTVAHSIFKRWRPLFRSDELFLEIKLVL--DVFTAPFLNLLKTVDEQITANEKASLNILFDVLLVLIKLYYDFQVGMGIFHKYLS
7	MUSTER	1b3uA	0.112	0.995	0.817	threading_7	NQHVKSALASVIMGLSPILKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATNLKKLVGKATIIPKVLAMSGDPNYLHRMTTLFCINVLSEQDITTKHMLPTVLRMA-ANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQ
8	SPARKS	3e7qa	0.119	0.860	0.943	threading_8	----------------------NQEVRFS-------RLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHDGKDALVAEAYLAVTGRVMRLLRGAIDTAPGGARPRLFFEASFSAELLDPQLLDAWLAFWGAVGS-IEAIGRVHDHSYGEYRALLVGVLRQLAEEGAELAAISLSALLDGLWLESGTPRQGVQICEAWVDGLEA
9	PROSPECT2	1ejlI	0.158	1.000	1.120	threading_9	LIPKFVSFPIQFESAWALTNIASGTGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPTDGPNERIEMVVKKGVVPQLVKLLGATELALAVFPSLLTNPKTNIQKEATWTMSNIQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSIQVILDAISNIFQAYFS
10	PPA-I	4a2nB	0.112	0.833	0.926	threading_10	MNENLWKICFIVMFIIWVFVRK-VYGTRAMKNKSKKKVRPNFEKSLVFLNFIGMVFLPLTAVFSS--YLDSFNINLPDSIRLFALIVTFLNIGLFTGNNWSAILEIKDGHKLVKEGIYKN--IRHPMYA--HLWLWVITQGIILSN--WVVLIFGIVAWAILYFIRVPKEEELLIEEFGDEYIEYMGK---------------------------

Predicted Tertiary Structure


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TM-score=0.927 to 1pw4A SCOP code=f.38.1.1	TM-score=0.895 to 1pw4A SCOP code=f.38.1.1	TM-score=0.913 to 1pw4A SCOP code=f.38.1.1	TM-score=0.510 to 1xm9A SCOP code=a.118.1.24	TM-score=0.837 to 1oyzA SCOP code=a.118.1.16