Template-based Modeling Results for YCGE_ECOLI

Submitted Primary Sequence

>Length 243
MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP
CCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP
542021010032020312001002422102413213211210233002001002201312020210120032223323310220132012112111122122201100420103200220002012202332221200001000000100010013234332320000002232302000100100222120000221031122310321000000222113401310220142112011325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDEEDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRARIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRKPGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGMAPTRRQNELLQHWGEQGYKVIFHAP
1	MUSTER	3d6yA	0.130	0.951	1.146	threading_1	ESYYSIGEVSKLANVSIKALRYYDKI-DLFKPADPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLE----MEELFAFYTEQERQIREK-LSALEQTISLVKKRMKRQMEYPALGEVFVLDEEEIREAEGIGPENVLNASYSKLKKFIESADGFTNNSYGATFSFQPYTSI------EMTYRHIFTPVLTNKISSITPDIPKGRYACIAYNFSYFLNLQKLIKYIADRQLTLIIPIH
2	SPARKS	1exja	0.088	0.930	2.420	threading_2	ESYYSIGEVSKLANVSIKALRYYDKIDLFPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQI--REKLDFLSALEQTISLVKKRMKRQMEYPALEIRIIQTEAEGIGPENVLNASY-----SKLKKFIESADGFTNNSYGATFSFQPYT--------SIDEMTYRHIFTPVLTNKQISSITPGRYACIAYNFSYFLNLQKLIKYIADRQLTV--VSD
3	PROSPECT2	1exja	0.102	0.926	1.862	threading_3	ESYYSIGEVSKLANVSIKALRYYDKIDLFKPAVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLD--FLSALEQTISLVKKRMKRQMEYPALIIQTEAEGIGPENVLNASYSKLKKFIES-------ADGFTNNSYGATFSFQPYTSID---------EMTYRHIFTPVLTNKQISSITPDMEITTIPKGHYFLNLQKLIKYIADRQLTVIIPIH
4	SP3	1exja	0.093	0.971	2.586	threading_4	ESYYSIGEVSKLANVSIKALRYYDKIDLFPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGTPLEEMKKAQDLEMEELFAFYTEQERQI--REKLDFLSALEQTISLVKKRMKRQEYPALGEVFVLDEIQTEAEG--IGPENVLNASYSKLKKFIESADGFTNNS-YGATFSFQPYTSIDEMTYRHIFTPVLTNKISSITPDMEITTIKGRYACIAYNFSYFLNLQKLIKYIADRQLTV--VSD
5	PPA-I	3gp4A	0.137	0.539	1.435	threading_5	--SLNIKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLAFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERS--------------------------------------------------------------------------------------------------------------
6	HHPRED-l	2dg6_A	0.168	0.712	2.843	threading_6	----RLADLSKRSGVSTATIKYYLREGLLPPG---------YDEDHLRRLRLVRALIQVGVPVATAREVLGHVDDDSLGRTVRLGAALDPAVAA-ARVEVDRLLELLGPLSPVHRSLVVAVA-ALRRLDYPWDAEL-AGEL--EVARRDLDF-ETHASEAEKVE-AVAAAVLFQPVLRALEEESARRYGIELE--------------------------------------------------
7	HHPRED-l	1r8d_A	0.211	0.449	3.009	threading_7	MK-YQVKQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGFRLDEIKEMLDHPNFDRKAALQSQKEILMKKK-----QRMDEMIQTIDRTLL-----------------SVD---------------------------------------------------------------------------------------------------------------
8	HHPRED-g	2i2x_B	0.091	0.811	2.367	threading_8	--------------------------------------MLDFTEASLKKVLTRYNVALEKALPEEAAEEL--------YPKDELIYPIAKAIFEGEEDDVVEGLQAAIEAKDPIDLIDDALMVGMGVVIRLYDEGVLPNVMMSADAMLEGIEYCKENSGAKTKGTVVCHVAEGDVHDIGKVTALLRANGYNVVDLGRDVPAEEVQKEKPIMLTGTALMTTTMYAKEVNDMLLENGIPFACGGG
9	SAM-T99	2vz4A	0.272	0.379	2.429	threading_9	---YSVGQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGFPLDEVAALLDRRQHELLSARIGKLQKMAAAVEQA----------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-g	1y80_A	0.155	0.346	2.224	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------MPSVGKIVLGTVKGDLHDIGKVAMMLESGGFTVYNLGVDIEPGKFKKYQPDIVGMSALLTTTMMNKSTIDALIAAGVKVIVGGA

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.684 to 3d6yA SCOP code=a.6.1.3	TM-score=0.687 to 3d6yA SCOP code=a.6.1.3	TM-score=0.617 to 3d6yA SCOP code=a.6.1.3	TM-score=0.655 to 3d6yA SCOP code=a.6.1.3	TM-score=0.673 to 3d6yA SCOP code=a.6.1.3