Template-based Modeling Results for YCFZ_ECOLI

Submitted Primary Sequence

>Length 262
MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
CCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCEEEEECCCCHHCCHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
4420110011000000111222102002100121212022132012102102321310100000131212110342131001200211231301000001242120000121303221323100000111100102010002001100000112003222231221112133233113122211000010000000120010011000001000000012101300000012200011122122011100101111222234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKFIILLSLLILLPLTAASKPLIPIMKTLFTDVTGTVPDAEEIAHKAELFRQQTGIAPFIVVLPDINNEASLRQNGKAMLAHASSSLSDVKGSVLLLFTTREPRLIMITNGQVESGLDDKHLGLLIENHTLAYLNADLWYQGINNALAVLQAQILKQSTPPLTYYPHPGQQHENAPPGSTNTLGFIAWAATFILFSRIFYYTTRFIYALKFAVAMTIANMGYQALCLYIDNSFAITRISPLWAGLIGVCTFIAALLLTSKR
1	PROSPECT2	1g55a	0.107	0.962	1.188	threading_1	VNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMSPPNSFLHILDILPRLQKLPKYILLENVKGFEVSSTRDLLIQTIETSLGIPNSRLRYFLIAKLQSEPLPFQAPGQVLMEFPKLSVKML---KDFLEDDTDVNQYLLPPKSLLRYALLLDIVQPTRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLFTPKEIANLLGF-------PPEFGFPEKITVKQRYRLLVHVVAKLIKILYE
2	SPARKS	2kw7a	0.163	0.584	1.061	threading_2	------------MRVYKPEDVPNVQLSTRLVTDEAGLLSNEEVMNGRLRAIRSSHAVEFAVVTLPSIGDA-PLEDFTLKLARQWGVGNEKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSGNYAEGLSEGVLAVQQVLDGS-------LEHHHHHH-----------------------------------------------------------------------------------------
3	PROSPECT2	1q7mA1	0.114	0.935	1.109	threading_3	MRNRREVSKLLSERVLLLDGAYGTEFMK------YGYDDLPEELNIKLKVHRSIESGSDVILTNTFGATRMKLRKHGDPIVRNAVRIARRAAGEKLVFGDIGPT------GELPYPLGSTLFEEFYENFRETVEIMVEEGFSDILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTD-----PANFAITFDELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSRKKK
4	HHPRED-l	2kw7_A	0.190	0.584	1.255	threading_4	MR------------VYKPEDVPNLADSTRLVTDEAGLLSNAEVMNGRLRAIRSSHAVEFAVVTLPSIGD-APLEDFTLKLARQWGVGNEKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSGNYAEGLSEGVLAVQQ-VLDGSLEH------HHHHH-----------------------------------------------------------------------------------------
5	PROSPECT2	1lhpa	0.072	0.950	1.093	threading_5	ECRVLSNRAATFPLQVLGFEVDAVNSVQFSNHTGYSHWLNSDELQELYDGLKLNHVNQYDYVLTGYTRDKSFL----AMVVDIVQELKQQNPRLVYVCDPVMGDQ----RNGEGAMYVPDPVADIITPNQFEAELLTGRKIHSQEEALEVMDMLHSMGPDTVVITSSNLLSPRGSDVDAVFVGTGDLFAAMLLAWTHKHPNNLKVACEKTVSAMHHVLQRTIKCA-----KAKSGEGVKPSPAQLELRMVQSKKDIESPEIV
6	HHPRED-g	2kw7_A	0.203	0.584	1.507	threading_6	MRVY------------KPEDVPNVQLSTRLVTDEAGLLSNAEVMNGRLRAIRSSHAVEFAVVTLPSIGD-APLEDFTLKLARQWGVGNEKNNNGLLLVLVLDQRRVRFETGYGLEGYLPDGLLSRIIHDRMIPHFRSGNYAEGLSEGVLAVQ-QVLDGSLE------HHHHHH-----------------------------------------------------------------------------------------
7	PROSPECT2	1bia_	0.111	0.828	1.082	threading_7	MKDNTVPLKLIALL----ANGEFHSG-EQLGETLG---MSRAAINKHIQTLRD-WGVDVFTVEPIQLLNAKQILGQLDSTNQYLLDRIGELKSGDACIAEYFGANLYLSMFWRLEQPAAAIGL-------------------SLVIGIVMAEVLRKLGADKVRVKWPNMAMWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRG-----------------IDKQR
8	HHPRED-l	3pvh_A	0.116	0.557	1.254	threading_8	--------------SASEFNILDGPPKETYVVDDAGVLSRVTDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEK--WYPSGNNKGIVVLITSQK-EGAITGGPAFIEAVGENILDATVSENLPV-LADEKYNEAVYSSAKRLVAAIDGQPDPGG--------------P------------------------------------------------------------------------------------
9	HHPRED-g	3pvh_A	0.115	0.565	1.506	threading_9	--------------SASEFNILNDPPKETYVVDDAGVLSRVTDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSEEGNNKGIVVLITSQK-EGAITGGPAFIEAVGENILDATVSENLPV-LADEKYNEAVYSSAKRLVAAIDGQPDPGG--------------P------------------------------------------------------------------------------------
10	HHPRED-l	2kpt_A	0.151	0.557	1.063	threading_10	-----------TETYVLAE-SPE-FYQ-DNVTDYTGQISSSDNIQAAIDDVKASEQKVIFVVFLSSFDGV-DPETWTQQALQAN--G-G--GNVLIYALAPEE-RQYGIQGGT---QWTDAELDAANNAA-FQALSQEDWAGSALALAESVGSSSSSSSGSS--SLEHHHHHH-----------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.676 to 1g55A SCOP code=c.66.1.26	TM-score=0.430 to 2hawB SCOP code=c.107.1.1	TM-score=0.826 to 3bofA SCOP code=c.1.21.2	TM-score=0.430 to 2hawB SCOP code=c.107.1.1	TM-score=0.781 to 1vi9A SCOP code=c.72.1.5