Template-based Modeling Results for YCFT_ECOLI

Submitted Primary Sequence

>Length 357
MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
CCHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
544222011101000000000000001023222212120020012011001100000000000000000012002212102001210010000000000000001001121212332121011011021001002000200100000000000000010023121000000000000011121111002000100000000000000010002102313110000000000000001110110000000000100100222121321100100121000000001000100000000002102111001000000000001000100000013012311110000012122222338
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQKELWINQIKGLCICLVVIYHSVITFYPHLTTFQHPLSEVLSKCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQWLALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIFSRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLRRHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSNTIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKLSQRAFSDLLFSPPSLPAAVSYSR
1	PROSPECT2	1jdha	0.109	1.000	1.714	threading_1	AASRHAIMRSPQMVSAIVRTMQNTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVAGILSNLGIEALVRTVLRAGDREDITEPAICALRHAQNAVRLHYGLPVVVKLWPLIKATVGLIRNLALCPANHAPLREQGAIPRLLLVRAMEEIVEGCTGALHILARDVHNRIVIIPLFVQLLYENIQRVAAGVLCELAQDKEAAEAIEAEGATAPSRNEG
2	PPA-I	3zuxA	0.112	0.826	1.264	threading_2	------------------------------NILSKISSFIGKTFSLWAALFAAAAFFAIPWLLGIIMFGMGLTLKPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLLPAEIAVGVILVGCCPGGTASNVMTYLARGN-----VALSVAVTSVSTLT---SPLLTPAIFLMLAGEMLEIQAAGMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDA-QKALTIEVGMQNSGLAAALAAAHFAAAPVVAVPGALFSVWHNISGSLLATYWAAKA-----------------------
3	PROSPECT2	1ee4a	0.076	0.952	1.709	threading_3	SDDMQEQLSATVKFRQIL------------SREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGT--SAQTKVVVDADAVPLFIQLLVKEQAIWALGNVAGDS---TDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNQVVINAGVLPALRLLNIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLKTKKEACWAISNASSGGLQRPDIIRYLVNRIIEVTLDALENILKMGEADKEARGLNINENADEKIFNCQQNEN
4	PPA-I	3g61A1	0.084	0.863	1.179	threading_4	---------------------------VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSF------WCLAAGRQIHKIRQKFFHAIMNQVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT----------------
5	PROSPECT2	1ejlI	0.089	0.944	1.682	threading_5	SNNLESQLQATQAARKLL------------SREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSTKAVVDGGAIPAFISLISEQAVWALGNIA--------GDGSAFRDLVIKHGAIDPLLALLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVQLVKLLGATELPIVTPALRAIGQTQKVIDAGALAVFPSLNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVDFKTQKEAAWAITNYTSGGTVEQIVYLVHPLMTKIIQVILDAISNIFQAAEKLGETEKLSIMEALQRHENEFS
6	PPA-I	3kb9A	0.076	0.885	1.120	threading_6	----------------------------AVPPSLRLWPKLQETTRTWLLEKRLMPADKVEEYADGLCYTDLMAGYYLGAP-------DEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYATWNARFARHFHTVIEAYDREFHNRTRGIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHHSLTLEEAIGEVRR---RVEECITEFLAVERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHHEGRYMVDSWDDRSTPPYVNN---
7	PROSPECT2	3a6pA1	0.074	0.941	1.655	threading_7	ALEALKFCEEFKICVPCGLRL--------AEKTQVAIVRHFGLQILEHVVKFRWNGMKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLE-------ILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVF------LKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTLRSSTQMTWGALFRHEILSRDNLVKMGFPSKTDSPS
8	PPA-I	3ripA2	0.084	0.804	1.090	threading_8	-----------------------SILKLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRNQTDAIKWRLRNHMAFL------VDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNLLDERGAAQL-----SILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYY------------------------------------
9	PROSPECT2	1xm9A	0.091	0.952	1.616	threading_9	EKYQAIGAYYIQHTC-----------------FQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLAEIQKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSGWCVVTGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLGMSQLIGLKEKGLPQIARLLQSGLSNMSRHPLLHRVMGNQVFPEVTRLLTSNSEDILSSACYTVRNLMASSMLNNIINLCRSSASPKALLSDMWSSKELQGVL
10	PPA-I	1pw4A2	0.069	0.571	1.072	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELV----P----------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.409 to 1c17M SCOP code=f.18.1.1	TM-score=0.600 to 1wa5B SCOP code=a.118.1.1	TM-score=0.416 to 1j30A SCOP code=a.25.1.1	TM-score=0.413 to 2r2vA SCOP code=h.1.3.1	TM-score=0.775 to 1ialA SCOP code=a.118.1.1