Template-based Modeling Results for YCFQ_ECOLI

Submitted Primary Sequence

>Length 210
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
553332322322312232221310021003001320131000110031030201001110211100011002100220012011201133310310012001100201223322200000100021133123002103210210130012002212332312341102100200000010000002222223201200110131023115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
1	MUSTER	3eupA	0.189	0.957	2.261	threading_1	-------QAMKELSK-SDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQACN-TYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIVK
2	SPARKS	3qbma	0.198	0.914	2.826	threading_2	-------------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGL-AGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDTNP-LRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIA--TEGAVLARILETATPLEHAYTHLATYITQQVR
3	PROSPECT2	3eupA	0.179	0.957	2.760	threading_3	--------QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKV-QACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEK
4	PPA-I	3eupA	0.174	0.957	1.972	threading_4	--------QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQ-ACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEV
5	HHPRED-l	3bru_A	0.172	0.886	1.630	threading_5	-----------------SLAHQSLIRAGLEHLTEKGYSSVGVDEILKAARVPKGSFYHYFRNKADFGLALIEAYDTYFARLLDQAFLDGSLAPLARLRLFTR-AEEG-ARHGFRRGCLVGNLGQE-GALPDDFRAALIGVLETWQRRTAQLFREAQACGELSADHDPDALAEAFWIGWEGAILRAKLELRPDPLHSFTRTFGRHFV----
6	HHPRED-g	2i10_A	0.312	0.824	1.736	threading_6	-------------------DDQVALQTA-ELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRY-CERTLQLEEA-V--RPTAHEAVLDFLTGRVEVFT------GC-TVQAGLASGEPHHEIVDLLTAAREQ-RQTVLDRFEKALADGDLPAGTDCTALARYV-AAVYGLSVEAASGAPREELTAAAILAAQVVP----
7	SP3	3qbma	0.203	0.914	2.915	threading_7	-------------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGL-AGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDTNP-LRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIA-TEGA-VLARILETATPLEHAYTHLATYITQQVR
8	SAM-T99	2i10B	0.293	0.829	2.358	threading_8	---------------------DQVALQTAELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRYCERTLQLEEAVR----PTAHEAVLDFLTGRVEVFTGQPF--GCTVQAGLASPHHEIVDLLTAAREQRQTVLDRFEKALAD----GDLPAGTDCTALARYVAAV-YGLSVEAASGAPREELTAAAILAAQVVP----
9	MUSTER	2hyjA	0.145	0.919	2.170	threading_9	-------------AEAQA-TRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRVVEPA-LAEPPGLRRLRAVCANSVGYLEEPLLPGGCLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADLTAAVDKGELPAGFDVEQALFEIVAAGLALNAAMQLQHDRTAADRARRAIERALAQS--
10	SPARKS	3eupa	0.179	0.957	2.555	threading_10	-------QAMKELSKSDR-TRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKV-QACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEV

Predicted Tertiary Structure


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TM-score=0.798 to 2hyjA SCOP code=a.4.1.9	TM-score=0.807 to 2hyjA SCOP code=a.4.1.9	TM-score=0.821 to 2hyjA SCOP code=a.4.1.9	TM-score=0.800 to 2hyjA SCOP code=a.4.1.9	TM-score=0.801 to 2hyjA SCOP code=a.4.1.9