Template-based Modeling Results for YCFP_ECOLI


  Submitted Primary Sequence

>Length 180
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
CEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
100000012122301111001210122203101110311321022003102301332333200000000000002100100302000000101112102221332332122012001212332331000001232220202200210340110001243113042022003202202314
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQHLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQTHKFKNISPHLQRIKAFKTLG
1MUSTER2qjwA0.1300.8561.472threading_1HCILAHGFESGPDALKVTALAEVAERLGWTHERPDLGDVRGRLQRLLEIARAATEKG---PVVLAGSSLGSYIAAQVSLQVPTRLFLVPP----------TKGPLPALDAA------------AVPISIVHAWHDELIPAADVIAWAQARSARLLLVDDGHRLGAVQAASRAFAELLQL-
2SPARKS2wtma0.1671.0001.717threading_2LCIIIHGFTGHSEERHIVAVQETLNEIGVATLRADMYTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDILIPLSPAAMIPEIARELLGLKFDPENNYVRVAQTIREDFVDKVLIVHGDQDEAVPYEASVAFSKQYKKLVTIPGDTHCYHHLELVTEAVKEFMLEA
3PROSPECT22qjwA0.1140.8781.714threading_3HCILAHGFESGPDALKVTALAEVAERLGWTHERPDFGQLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVPTRALFVPPTKGPLPAL----------------------DAAAVPISIVHAWHDELIPAADVIAWAQARSARLLLVDDGHRLGAVQAASRAFAELLQSL
4PPA-I2qjwA0.1010.8831.938threading_4HCILAHGFESGPDALKVTALAEVAERLGWTHERPDLGQLGDVRGRLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVPTRALFL---------VPPTKGPLPALDAA------------AVPISIVHAWHDELIPAADVIAWAQARSARLLLVDDGHRLGAVQAASRAFAELLQSL
5HHPRED-l1uxo_A0.1110.9501.381threading_5QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILN-PNPLPRLEDWLDTLSLYQHTLH-ENTYLVAHSLGCPAILRFLEHLQLRGIILVSGFAKSLPTLQ-LDEFTQG-SFDHQ----KIIESAKHRAVIASKDDQIVPFSFSKDLAQQDAALYEVQHGGHFLTSLPIVYDVLTSYFSK-
6HHPRED-g1uxo_A0.1190.9331.264threading_6QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILN-PNPLQRLEDWLDTLSLYQHT-LHENTYLVAHSLGCPAILRFLEHLQLRGGIILVSAKSLPTLQ--LDE------FTQGSFDHQKIESAKHRAVIASKDDQIVPFSFSKDLAIDA-ALYEVQHGGHGFTSLPIVYDVLTSYFSK-
7SP33pf8a0.1400.9891.615threading_7MAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLVVLLAPAATLKGDAQGVTYNPDHIPDLGGFYLRIAQQLPYEVVCLIHGTDDTVVSPNASKKYDQIYQTLHLIEGADHCFSDQKNAVNLTTDF--LQ
8SAM-T992qjwA0.1270.8781.152threading_8-CILAHGFESGPDALKVTALAEVAERLGWDLDARRDLGQLGDVRGRLQRLLEIARAATEKPVVLAGSSLGSYIAAQVSLQVPTRALFLVPPTKGPLPALDAAAVPIS---------------------IVHAWHDELIPAADVIAWAQARSARLLLVDDGHRLGAVQAASRAFAELLQSL
9MUSTER1uxoA0.0990.9501.424threading_9QVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNPNPLQPRLEDWLDTLSLYQHTL-HENTYLVAHSLGCPAILRFLEHLQLRIILVSGFAKSLPTLQLDEFTQGSFD---HQKIIES----AKHRAVIASKDDQIVPFSFSKDLAQQIAALYEVQHGGHGFTSLPIVYDVLTSYFSK-
10SPARKS3pf8a0.1340.9941.705threading_10MAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFNTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLVVLLAPAATLKGDAQGVTYNPDHIPDLGGFYLRIAQQLPTKPVCLIHGTDDTVVSPNASKKYDQIYSTLHLIEGADHCFSDQKNAVNLTTDFLQN-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.730 to 1uxoA
SCOP code=c.69.1.31
TM-score=0.740 to 1uxoA
SCOP code=c.69.1.31
TM-score=0.736 to 1uxoA
SCOP code=c.69.1.31
TM-score=0.730 to 1uxoA
SCOP code=c.69.1.31
TM-score=0.747 to 1uxoA
SCOP code=c.69.1.31