Template-based Modeling Results for YCEI_ECOLI


  Submitted Primary Sequence

>Length 191
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEEEEECEEEEEEEEEECCEEEEEECCCCCCCCEEEEEEEEEEEECCCHHHHHHHCCCCCEECCCCCEEEEEEEEEEECCCEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEEEEHHHCCCCCCCCCCCCEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
42301100000000000000012212012412100000201100002020102211010111343322120001010000213223103203223002023122010101102332320202010102211120202020113131222121000202020203103031211301220102010201237
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
1MUSTER1y0gA1.0000.8853.881threading_1----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
2SPARKS1y0ga1.0000.8855.822threading_2----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
3PROSPECT21y0gA1.0000.8853.592threading_3----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
4PPA-I1y0gA1.0000.8855.419threading_4----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
5HHPRED-l1y0g_A1.0000.8806.893threading_5----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQ-
6HHPRED-g1y0g_A1.0000.8855.992threading_6----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
7SP31y0ga1.0000.8855.631threading_7----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
8SAM-T991y0gA1.0000.8856.669threading_8----------------------ADYKIDKEGQHAFVNFRIQHLGYSWLYGTFKDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKYPQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGKIKLKDFNIKTDLGPASQEVDLIISVEGVQQK
9MUSTER3hpeA0.3480.8433.358threading_9----------------------KPYTID--KANSSVWFEVKHFKFNETRGVFDSFDGKIDADPNTKALNVFEGKIDIKSINTRNKKRDDHLKTAEFFDVVKYPKGSFKMTKYED----GKIHGDLTLHGVTKPVVLEAKIQAPLQNPMNKEFMVLQAEGKINRKDFGIGKTFAVVGDEVKIELKLEAYA--
10SPARKS3hpea0.3540.8435.507threading_10----------------------KPYTIDK--ANSSVWFEVKHFKFNETRGVFDSFDGKIDADPNTKALNVFEGKIDIKSINTRNKKRDDHLKTAEFFDVVKYPKGSFKMTKYE----DGKIHGDLTLHGVTKPVVLEAKIQAPLQNPMNKEFMVLQAEGKINRKDFGIGKTFSVVGDEVKIELKLEAYA--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.941 to 1y0gA
TM-score=0.998 to native
SCOP code=b.61.6.1
TM-score=0.941 to 1y0gA
TM-score=0.998 to native
SCOP code=b.61.6.1
TM-score=0.941 to 1y0gA
TM-score=0.998 to native
SCOP code=b.61.6.1
TM-score=0.941 to 1y0gA
TM-score=0.998 to native
SCOP code=b.61.6.1
TM-score=0.941 to 1y0gA
TM-score=0.998 to native
SCOP code=b.61.6.1

  Experimental Structure

Download 1y0gA
SCOP code=b.61.6.1