Template-based Modeling Results for YCEH_ECOLI

Submitted Primary Sequence

>Length 215
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
55331222102000000233221233120001000010133223212220222101200220152211111222122022012301213113040212100000101021232122021102210312202201200231133331100020132323322100200113132321123222223231321022012101202310220033125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALITTLLLRGAQTPGELRSRAARMYEFSDMAEVESTLEQLANREDGPFVVRLAREPGKRENRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD
1	MUSTER	3bz6A	0.432	0.753	2.728	threading_1	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRLV---GSRADRWEHKVDK----GLELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARG---LATLVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
2	SPARKS	2nr3a	0.432	0.753	4.877	threading_2	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRLV---GSRADRWEHKVDKG----LELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARG---LATLVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
3	PROSPECT2	2nr3A	0.432	0.753	2.594	threading_3	NALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRL---VGSRADRWEHKVDKG----LELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARGLAT---LVPRQSGQREDRY-HLIGDP----------------------------------------EDLQD
4	PPA-I	3bz6A	0.432	0.753	4.147	threading_4	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRLV---GSRADRWEHKVDK----GLELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARGLAT---LVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
5	HHPRED-l	2nr3_A	0.426	0.753	11.657	threading_5	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTR--LV-GSRADRWEHKVDKG----LELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARG---LATLVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
6	HHPRED-g	2nr3_A	0.426	0.753	9.794	threading_6	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTR--LV-GSRADRWEHKVDKG----LELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARG---LATLVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
7	SP3	2nr3a	0.432	0.753	4.881	threading_7	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRLV---GSRADRWEHKVDKG----LELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIAR---GLATLVPRQSGQREDRY-HLIGDPEDLQD----------------------------------------
8	SAM-T99	3bz6A	0.435	0.749	7.515	threading_8	-ALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRL---VGSRADRWEHKVDK----GLELVPAQVILTGLLLLRGPQTVSELLTRSNR-HDFEDSEQVVHQLERLIARG---LATLVPRQSGQREDRY-HLIGDPEDLQ----------------------------------------D
9	MUSTER	3bz6A1	0.481	0.367	1.106	threading_9	EALQLNSTEVRILGCLIEKQATNPETYPLTLNALVIACNQKTSRDPV-NLTQGQVGQSLRALEGRGLTRLV---GSRADRWEH------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	3bdda	0.194	0.623	0.887	threading_10	---------------------------------------------------------------------QEEDLLYRLKVADETISNLFEKQLGISLTRYSILQTLLKDAPLHQLALQERLQI-----DRAAVTRHLKLLEESG---YIIRK-RNPDNQREVLVWP---TEQAREALITNPSAHHQAIKTSNQILVEESEQFLATLDKLLIGLQN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.865 to 3bz6A SCOP code=a.4.5.75	TM-score=0.863 to 3bz6A SCOP code=a.4.5.75	TM-score=0.862 to 3bz6A SCOP code=a.4.5.75	TM-score=0.852 to 3bz6A SCOP code=a.4.5.75	TM-score=0.865 to 3bz6A SCOP code=a.4.5.75