Template-based Modeling Results for YCEF_ECOLI

Submitted Primary Sequence

>Length 194
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
CCCEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEECCEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCHHCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
54300001202103100330502010001303223423310320022001210210033123200000010000211001212123202300230133100000000002234221111011020202401311021004332112100002021100000120203111001100000002003322221234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQLVLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTFYTGLALFNSANGHLQTEVEPFDVHFRHLSEAEIDNYVRKEHPLHCAGSFKSEGFGITLFERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG
1	MUSTER	1excA	0.348	0.948	4.201	threading_1	MKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDG-DYYSVMGLPISKTMRALRHF-------
2	SPARKS	1ex2a	0.337	0.948	5.883	threading_2	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGD-YYSVMGLPISKTMRALRHF-------
3	PROSPECT2	2p5xA	0.277	0.969	4.189	threading_3	LKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKFATPYGYAMETAKQKALEVANRRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHG-DFLNVVGFPLNHFCKQLVKLYY-----
4	PPA-I	1excA	0.337	0.948	7.828	threading_4	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGD-YYSVMGLPISKTMRALRHF-------
5	HHPRED-l	2p5x_A	0.277	0.969	7.565	threading_5	HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASTPYGYAMETAKQKALEVANRRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCDHQLVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHG-DFLNVVGFPLNHFCKQLVKLYY-----
6	HHPRED-g	1ex2_A	0.348	0.948	6.218	threading_6	MTPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDG-DYYSVMGLPISKTMRALRHF-------
7	SP3	1ex2a	0.337	0.948	5.662	threading_7	TKPLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGD-YYSVMGLPISKTMRALRHF-------
8	SAM-T99	1excA	0.341	0.938	7.001	threading_8	--PLILASQSPRRKELLDLLQLPYSIIVSEVEEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMVCLDGECLGKPQDQEEAASMLRRLSGRSHSVITAVSIQA--ENHSETFYDKTEVAFWSLSEEEIWTYIETKEPMDKAGAYGIQGRGALFVKKIDGDY-YSVMGLPISKTMRALRHF-------
9	MUSTER	2amhA	0.188	0.959	3.832	threading_9	IRTMIIGTSSAFRANVLREHFRNFVLLPPDIDEKAYRAADPFELTESIARAKMKAVLEKARQAIALTFDQVVVKGDEVREKPLSTEQCRSFIASYSGGGVRTVATYALCVVGTENVLVAHNETETFFSKFGDDIVERTLERGACMNSAGGLVVEDEDMSHVVRIVGT-SYGVRGMEPAVVEKLLSQL-------
10	SPARKS	2p5xa	0.271	0.969	5.489	threading_10	HKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASTPYGYAMETAKQKALEVANRLAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGD-FLNVVGFPLNHFCKQLVKLYY-----

Predicted Tertiary Structure


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TM-score=0.968 to 1excA SCOP code=c.51.4.2	TM-score=0.966 to 1excA SCOP code=c.51.4.2	TM-score=0.952 to 1excA SCOP code=c.51.4.2	TM-score=0.900 to 1excA SCOP code=c.51.4.2	TM-score=0.968 to 1excA SCOP code=c.51.4.2