Template-based Modeling Results for YCEA_ECOLI


  Submitted Primary Sequence

>Length 350
MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE
CCHHHHHHCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHCCCCCCCCCCCHHHHHHCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCEEEEECCCHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE
23111121123102221223232100000010031210310120012002313010100003300101010002102101100231122031020111233323113213132322000000222312022013202121022003332000010212211210203201102031033202201421323332200000200210220011044211320100210012003313432120202130111334223412332122022011202122203222010100002100232331003202322221232122131023212310332323122222234347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPVLHNRISNDALKAKMLAESEPRTTISFYKYFHIADPKATRDALYQLFTALNVFGRVYLAHEGINAQISVPASNVETFRAQLYAFDPALEGLRLNIALDDDGKSFWVLRMKVRDRIVADGIDDPHFDASNVGEYLQAAEVNAMLDDPDALFIDMRNHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGERISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPEEQRRRRAGRENGNKIFNKSRGRLNTTLCIPDPTE
1MUSTER1yt8A10.1330.9030.822threading_1IAV----RTFHDIRAALLAR-RELALLDVFANLPLSR---LELEIHARVPRRDTP-ITVYDDGE---------GLAPVAAQRLHDL--GYSDVALLSGWRNAGGE------LFRDVNVPSKAFGELVEAERHTPSLAAEEVQALLDRAEAVILDARRFDEYQ-TSIPGGISVPGAELVLRVAELA----PDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNVAALRNGTIGWTLAEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLAQWQD--EHDRTTYLLDVPEEYEALPGSRSQLVQETDHVASVRGSASWLAQGWQVAVLD-SEADFSERGAWSAPLP
2SPARKS2kl3a0.2060.3601.817threading_2-----------------------------------------------------------------------------------------------------------------------------------MEPQSDAHVLKSRLEEPAFTILDVRDRSTYNDGHIMGAMAMPIEDLVDRASS-----SLEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKA----IGGPTEGIIESRTDDYNVVSRLEHHHHHH------------------------------------------------------------------------------------
3PROSPECT21yt8A10.1400.8571.664threading_3IA----VRTFHDIRAALLA-RRELALLD------VREEDPFLSRLELEIHARVPRRITVYDDGEG---------LAPVAAQRLHDLG--YSDVALRNAGGELFRDVNVPSK----------AFGELVEAERHTPSLAAEEVQALLDRAEAVILDARRFDEYQ-TSIPGGISVPGAELVL----RVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGIPPVAALRNGTIGWTL--AGQQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERAQWQDEHDRTTYLLDVRTPEEYEAGYRRPYEGTDNPREAQGYLDWEFGLVEQLGRD-----------GTHGFFVIE
4PPA-I1qxnA0.1520.3771.386threading_4---------------------------------------------------------------------------------------------------------------ADMGEKFDATFKAQVKAAKADMVMLSPKDAYKLLQEPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKSG-LDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEELDRSHHHHHH----------------------------------------------------------------------------------------------------------
5HHPRED-l1gmx_A0.1960.3062.248threading_5---------------------------------------------------------------------------------------------------------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMR------DNDFDTPVMVM-YHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEV----AYGA-------------------------------------------------------------------------------------------------------
6HHPRED-g1gmx_A0.1960.3061.967threading_6---------------------------------------------------------------------------------------------------------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAF---MRD-N--DFDTPVMVM-YHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAE----VAYGA-------------------------------------------------------------------------------------------------------
7SP31qxna0.1990.3891.756threading_7---------------------------------------------------------------------------------------------------ADMGEKFDAT---FKAQV---------KAAKADMVMLSPKDAYKLLQEPDITLIDVRDPDELKAMGKPDVKNYKHMSRGKLEPLLAKS-GLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLE----EGLP--------SLDRSHHHHHH------------------------------------------------------------------------------------------
8SAM-T991qxnA0.2080.3432.078threading_8------------------------------------------------------------------------ADMGEKFDATFKA---------------------------------------QVKAAKADMVMLSPKDAYKLLQEPDITLIDVRDPDELKA-----MGKPDVKNYKHMSRGKLEPLGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGL------------------------------------------------------------------------------------------------------------------
9MUSTER3nt6A20.1920.5800.712threading_9LAVGATGKNEKQLKQA---AFEKVYVHTASHASYYPGAEVVSFKLLFDPVKGTIFGAQAVGKDGI-------DKRIDVAVAQRAGTVEQLQHLEL-----SYAPPYGS------KDVINQAAFVASNIIKGDATPIHFDQIDNL--SEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDR--------ELPKDKEIIIFSQVGLRGNVAYRQLVNNGYR-ARNLIGGYRTYKFAS-------------------------------------------------------------------------------------------------------------------
10SPARKS1gmxa0.2060.3061.813threading_10---------------------------------------------------------------------------------------------------------------------------------MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDT-------LGAFMRDNDFDTPVMVMYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA-----------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.795 to 1yt8A
SCOP code=c.46.1.2
TM-score=0.764 to 1yt8A
SCOP code=c.46.1.2
TM-score=0.550 to 1gn0A
SCOP code=c.46.1.3
TM-score=0.742 to 1yt8A
SCOP code=c.46.1.2
TM-score=0.593 to 1qxnA
SCOP code=c.46.1.3