Template-based Modeling Results for YCDZ_ECOLI

Submitted Primary Sequence

>Length 163
MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA
4341101000000000000000100000000000000000012321130001000010000000000000120022030000000000000000101130021000000000000002120200000000000000003100100012123323332223335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWKLVLPSLALGLIFGYAMKNSGLWLAARSAKTAHREQEIKNKA
1	PROSPECT2	1t33A	0.113	0.920	1.093	threading_1	MNQLIAAALAQDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIVNLSKFISREQLSPTSAYQLVHEQVIDPLHTH-------------LTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELQ
2	HHPRED-g	2b2h_A	0.176	0.908	1.006	threading_2	PHSIPLTLIGAALLWFGW------------FGFNGGSALAANDVAGFVWMKPGSLGIVSGAIAGLAAITPAAGF--VDVKGAIVIGLVAGIVCYLAMDFRIKKKSGGLWGSVGILANFGNPQLLLIAVASTTAYAFLVTLILAKAVDAAVGLRVSS-QEEYVG
3	PROSPECT2	1pw4A2	0.155	0.951	1.080	threading_3	NKLLWYIAIANVFVYLLRYGISSWAYFLYEYAGIPGTLLCGVFRGNR----GATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHELAPKKAAGTAAGFTGFFGWDGGFMVMIGGSILAVIL----LIVVMIGEKRRHEQLLQELVP
4	MUSTER	3orgA3	0.125	0.982	0.797	threading_4	TQLYAILGALMGVLGALFIRCVRSIYLVGVVALFASALQYPFPRATINDLFKALILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLYGELMRVVFGNAIPGAVVGAAAFTAG-RALSCAVIIFEVTLVPVLISVLLAVIVGNAFNRS--YETLVLMKH
5	SPARKS	2dg8a	0.168	0.951	0.960	threading_5	LAATLDLIAEEGIARVSHRRIAQRAG-VP-LG--SMTYHF----TGIEQLLREAFGRFTDHIVAVFDEHLGAAADRDEAREAVADLVHELSEDSQRDLVLTQELYTLAARQPAYRELTHEWMRRSRVHLPGTARQLDALIEGLTLHRALAREPHGRALTLEAI
6	PROSPECT2	2fbqA	0.087	0.920	0.985	threading_6	AQSETVERILDALIQAVFSRFLGPFCASLEKELDRRQAKPEAQHATLEDLLHLLVSQAMADLSIFMRLLGLAFSQSQGHLRKYLEEVYGKVF-------------RRYMLLVNEAAPKLPPIELRVHFMLGAAAFSMSGIKALRAMTDFGVNTSTEQVMHLID
7	PPA-I	2hkuA2	0.169	0.798	0.911	threading_7	--------------------------CAAVLRAGKRAEDDAATAETVGDYTEKLVGSLLGPGAPSVELFTSALTGRRSELRDLITDTLRTLHSSGEVALIRTLRAGIDVESKAFWSAI--FGLVIQKTATGESFGYSLEEAVAVIFANLQIPETVRNT-----
8	HHPRED-l	2b2h_A	0.177	0.902	0.536	threading_8	PHSIPLTLIGAALL------------WFGWFGFNGGSALAAND-VAINAVVVGSLGIVSGAIAGLAAITPAAGFV--DVKGAIVIGLVAGIVCYLAMDFRIKKKSGGLWGSVGILANFGNPQLLLIAVASTTAYAFLVTLILAKAVDAAVGRVSSQEEYVGL-
9	HHPRED-g	1u7g_A	0.237	0.828	0.774	threading_9	PHNLP-VFTGTAILYI------------GWFGFNAGSAGVATAAAILGWIFPSLLGACSGAIAGLVGVTPACGY--IGVGGALIIGVVAGLAGLWGVT-LKHGVCG-IVGCI-IFAASS-GHQQLESIAITIVWSGVVAFIGYKLADLTVGLRV---------
10	SP3	2dg8a	0.168	0.951	0.551	threading_10	LAATLDLIAEEGIARVSHRRIAQRAGV--PLG--SMTYHF----TGIEQLLREAFGRFTDHIVAVFDEHLGAAADRDEAREAVADLVHELSEDSQRDLVLTQELYTLAARQPAYRELTHEWMRRSRVHLPGTARQLDALIEGLTLHRALAREPHGRALTLEAI

Predicted Tertiary Structure


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TM-score=0.700 to 1t33A SCOP code=a.4.1.9	TM-score=0.474 to 1r0kB SCOP code=a.69.3.1	TM-score=0.728 to 1pw4A SCOP code=f.38.1.1	TM-score=0.608 to 1kpkA SCOP code=f.20.1.1	TM-score=0.911 to 2hkuA SCOP code=a.4.1.9