Template-based Modeling Results for YCBV_ECOLI

Submitted Primary Sequence

>Length 171
MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
CCHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCEECCCCCCEEEECCCCCHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
421210100000000000200013020101010121102014424302010030112202323223211010101101232220200010111122220000121232020000000122422132232122111322301010100020132403202010101020323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLKRIIWILFLLGLTWGCELFAHDGTVNISGSFRRNTCVLAQDSKQINVQLGDVSLTRFSHGNYGPEKSFIINLQDCGTDVSTVDVTFSGTPDGVQSEMLSIESGTDAASGLAIAILDDAKILIPLNQASKDYSLHSGKVPLTFYAQLRPVNSDVQSGKVNASATFVLHYD
1	MUSTER	2jmrA	0.367	0.877	2.276	threading_1	---------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTTKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
2	SPARKS	3jwne	0.362	0.871	4.444	threading_2	----------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
3	PROSPECT2	2j2zB	0.197	0.830	2.455	threading_3	-------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFSDSRIRVTFDGVRGETPDKF----NLSGQAKGINLQIADVRGNIARAGKVMPAIPLTGNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE
4	PPA-I	2j2zB	0.197	0.830	2.951	threading_4	-------------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFSDSRIRVTFDGVRGETPDKF----NLSGQAKGINLQIADVRGNIARAGKVMPAIPLTGNEEALDYTLRIVRNGKKLEAGNYFAVLGFRVDYE
5	HHPRED-l	2xg5_B	0.203	0.807	4.157	threading_5	--------------------------AAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNDSRIRVTFDGVRG-ETPDKFNL---SGQAKGINLQIADVRGNIARAGKVMPAIPLT--EEALDYTLRIVRNGKKLEAGNYFAVLGFRVDY-
6	HHPRED-g	2uy6_B	0.221	0.819	3.993	threading_6	-------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGV-SKPMDLDIELVNCDITAFTVKLAFTGPIVNGHSDELDTN---GGTGL-AIVV-QGAGKNVVFDSEGDANTLKDGENVLHYTAVVKKVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.362	0.871	4.251	threading_7	----------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQIPLNAPSSALSWPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jmrA	0.373	0.877	4.284	threading_8	---------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNSALSWTTLTPGPNTLNFYARLMATQVPVTAGHINATATFTLEYN
9	MUSTER	2jtyA	0.288	0.895	2.153	threading_9	-----------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQGATSSAVGFNIQLNDCDTNVSKAAVAFLGTADAGHTNVLALQSAAGSATNVGVQILDRTGAALTLDGATFETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
10	SPARKS	2jmra	0.367	0.877	4.036	threading_10	---------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALENTVSAASGLGIQLLNEQQNQIPLNAPSSALSWTGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.693 to 1klfP SCOP code=b.2.3.2	TM-score=0.809 to 2j2zB SCOP code=b.2.3.2	TM-score=0.699 to 1klfP SCOP code=b.2.3.2	TM-score=0.815 to 2j2zB SCOP code=b.2.3.2	TM-score=0.815 to 2j2zB SCOP code=b.2.3.2