Template-based Modeling Results for YCBU_ECOLI

Submitted Primary Sequence

>Length 180
MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEECCCCCCEEEECCCCCHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCEECCCCCCCCEEECCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ
441210110000000000000010133201010102002200202242220102003021220232222222110201021012112102000103222213200101221222210100000002232322131232321111421201020100020142302102010101020223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKKTIFQCVILFFSILNIHVGMAGPEQVSMHIYGNVVDQGCDVATKSALQNIHIGDFNISDFQAANTVSTAADLNIDITGCAAGITGADVLFSGEADTLAPTLLKLTDTGGSGGMATGIAVQILDAQSQQEIPLNQVQPLTPLKAGDNTLKYQLRYKSTKAGATGGNATAVLYFDLVYQ
1	MUSTER	2jmrA	0.272	0.839	2.162	threading_1	-------------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLAL---ENTVSAASGLGIQLLNEQQ-NQIPLNAPSSALSWTTKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
2	SPARKS	3jwne	0.258	0.839	4.322	threading_2	--------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLAL---ENTVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
3	PROSPECT2	2jtyA	0.293	0.872	2.361	threading_3	---------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVSKAAVAFLGTAIDAGHTNV-LALQSSAAGSATNVGVQILDRTGAATLDGATFSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
4	PPA-I	2jmrA	0.250	0.844	2.765	threading_4	-------------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLL---ALENTVSAASGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
5	HHPRED-l	2jty_A	0.297	0.861	4.349	threading_5	---------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVSKAAVAFLGTADAGHTNVLALQ--SSAAGSATNVGVQILDRTGAALTLDGATSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQY-
6	HHPRED-g	2uy6_B	0.268	0.789	4.121	threading_6	-----------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGV-SKPMDLDIELVNCDITAFTVKLAFTGPIVNGHSDELDTN------GGTGL-AIVV-QGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.258	0.839	4.114	threading_7	--------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLALEN---TVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jtyA	0.312	0.856	4.659	threading_8	---------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVSKAAVAFLGTADAGHTNVLALQS--SAAGSATNVGVQILDR-TGAALTLGATFSETTLNNGTNTIPFQARYFATGA-ATPGAANADATFKVQY-
9	MUSTER	2jtyA	0.301	0.867	2.146	threading_9	---------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVSKAAVAFLGTADAGHTNVLALQS--SAAGSATNVGVQILDRTGAALTLDGAFSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
10	SPARKS	2jmra	0.257	0.844	3.738	threading_10	-------------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLAL---ENTVSAASGLGIQLLNEQQNQIPLNAALSWTTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.686 to 1klfP SCOP code=b.2.3.2	TM-score=0.685 to 1klfP SCOP code=b.2.3.2	TM-score=0.698 to 1klfP SCOP code=b.2.3.2	TM-score=0.680 to 1klfP SCOP code=b.2.3.2	TM-score=0.700 to 1klfP SCOP code=b.2.3.2