Template-based Modeling Results for YCAO_ECOLI

Submitted Primary Sequence

>Length 586
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCHHHHHHHHCCCCCCEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
5542223133011320022014103402010110122230210000001143000001203111321000100020021002211111111232112121221122211222333311210012102212223231102101213222332100001001113312010001000011101000001111201020001001100202012321112302231023131012002102422010000001121400000000112222200000001110010012001100212113312212212121331221210112111220100021033312121132312110321011002003524110000013311010000001100201103001111111011001001202223133310220021024322320120020000001332112101001010000000110320120021013122211221001002001000210233322122002000411013001100100212100111220213032021012004003201311212245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTRQSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPEIPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLGLATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQTLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAHQSLLKAYEKLQRAKAAFWAK
1	PROSPECT2	1gw5b	0.084	0.814	1.566	threading_1	SKYFTTNKKGEIFEEAVKKVIAAMTV----------GKDVSSLFPDVVNCMQT-------DNLELKKLVYLYLMNYAKQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANALSEISESHPNSNLLDLNPQNINKLLTALNEWGQIFILDCLSNYNPKDDR------EAQSICERVTPR-----------------------------------LSHANSAVVLSAVKVLMKFLE----LLPKDSDYYNMLLKKLAPPLVTLLSG----------------------EPEVQYVALRNINLIVQKRPEI---------------LKQEIKVFFVKYN---DPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVQEAIVVIRDIFRKYPNKYESIIATLCENLDAMIWIVGEYAERIDNADELLESFLETQVQLTLLTAIV---KLFLKKPSETQ----ELVQQVLSIEPTLLDELICHIGS
2	SAM-T99	2hyzA	0.104	0.230	1.139	threading_2	--------------------------------------------------------------------------------------------------------------AEAWYNLGNAYY------------------------------------------------------------------------------------------------------KQ-GDYDEAIEYYQKA----------------------------------------------------------------------------------------ELDPRSAEAWYNLG-------------------------------------------------------------------------------------------------------------------------------NAYYKQGDYDEAIEYYQKALELDPR---SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----------------DPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS---
3	PROSPECT2	1qgra	0.102	0.974	1.431	threading_3	MEKNSLTSKDAIDANARREVKNYVLHTLGTIPVNQWPELIPQLVANVTNPNSTEGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESEYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVP------ILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATRYRDAAVMAFGCILEGPEPSQLKPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSA--------EPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSQKLLETTDRPDGHQNMEIVKNSAKDQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFSGGVQEDALMAVSTLVEPFLGIGLKNYAEYQLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAYLEVVLNTLQQASQAQVDKSDYDMVDYLEAYTGIVQGLKGDQENVHPDVMLVQPRV-EFILSFIDHIAGDEDHTDGVKDVLKLVEARPMIHELLTEGRRTKELRKLKNQA
4	PROSPECT2	1qbkb	0.084	0.954	1.427	threading_4	LIFVLTKLKSEDEDFIKSECLNNIGDSSPTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDRPLNIIPKFLQFFKHSSPKIRSHANQFIISRTQALLHIDSFTENLFALAGDEEPEVRKNVCRALVLLEVRMDRLL-------------------PHHNIVEYLQRTQDQDENVALEACEFWEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDDDVLANVYRDELLPHILPLLKELLFHHEWVVAEGCQGIPYLPELI---PHLIQCLSDKKALVYAHWVVSQPPDTYLKPLTLDSNKRVQEAACSAFAT-----LEEEACTELVPYLAYILDTLVFAFSVGHHLNKPEYIQLPPLIQKWNLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVPDQYEAPDKDFIVALDLLSGLAEGLGGNIEQLVARSNILTLYQCQDKPEVRQSSFALLGDLTKACFQHVKPCIADFPILGTNLNPEFISVCNNATGIEQPYIPVNRPNTPLRNIRDNEEKDSAFRGILKERLAAFYG
5	PROSPECT2	1de4c	0.100	0.833	1.427	threading_5	NENSYVPREAGSQENLALYVENQFREFKLSFVKIQVKDSAQNSVIIVDKNGRLVYLVENPGGYTKKDFEFAEKVANAESLAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSSGLPNIPRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTVSNVLKEIKIPDHYVVVGAQRDAWGPGAAKSGVGTALLLKLA-QMFSDMVLKDGFQPSRWSAGDFGSVGATEWLEGYLSSLHLKAFTYINLDKA----------VLGTSNFKVSAS------PLLYTLIEKTMQNVKHPVTGQFLYQDSNWAS-----------------------------KVEKLTLDNA-------AFPFLAYSGIPAVSFCFCEDTD------YPYLGTTMDTYKELIERIPELNKVARAAA----------EVAGQFVIKLTHDVELNLDYERY---------------NSQLLSFV-------RDLNQYRADIKEMGLSLLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVGSHTLPALLENLK-------LRKQNNGAFNETLFRNQLALATWTIQGAANVWDI
6	PROSPECT2	1b3ua	0.112	0.855	1.409	threading_6	AAADELRNEDLGVERTRSELLPFLTDT---------IYDEDEVLLALAEQLGTFTTLVGGPATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFSVCYPRVSSAVKAELRQYFRNLCSDDTPMVRRGEFAKVLELDNVKSEI----------------IPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTEDKSWRVRYMVADKFTELQKAVEITKTDLVPAFQNLMKDC------------------------EAEVRAAASHKVKEFCE--------NLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEV------------RLNIISNLDCVNEVIGIRQLSQSLLPAIVELA-----EDAKWRVRLAIIEYMPLVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVE-KFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDIT-TKHMLPTVLRMAVANVRFNVAKSLQ---------KIGPILDNSTLQSEVKPILEKLDVKYFAQEAA
7	MUSTER	1b3uA	0.113	0.889	0.803	threading_7	IKKLSTIALALGVERTRSELLPFLTDT-IYDEDEVLLALAEQLGTFLVGGPEYVHCLLPP--TVEETVVRDKAVESLRAISHEHDLEAHFVPKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFDDTPMVRRAAASKLGE-----------FAKVLELDNVEIIPMFSNLASDEQ-----DSVRLLAVEACVNIAQLLPQEDL--EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC-----------EAEVRAAASHKVKEFCENL-----SADCRENVIMSQI--LPCIKELVSDANQHVKSALASVIMGL-SPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLD---------CVNEVIGIRQLSQ---SLLPAIVELAED--AKWRVRLAIIEYMPLLAGQVEFFDEKLNSLCMAWLVDHVYA--IREAATSNLKKLV-GKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVC-GQDITTKHMLPTVLRMAGDPVANVRFNVAK-------LQKIGPILDNSTLQSEVKPILEKLTVDVKYFAQE
8	SPARKS	3mkqa	0.116	0.823	0.888	threading_8	NSST---YK----------------------VEKTLNVGLERSWCIATHPTGRKNYI-----------------------ASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVI-RGNEEVEQDEPLSLQTKELGSVDVFPQSLAH--SPNGRFVTV---------VGDGALAWRNKAFGKCQDFVWLIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRAKDVIWSD-NGELVMIVNTNSNGDEASKDAYLEAANNGNIDDSEGVDEAFDVLYELSES--ITSGKWVGDVFIFTTATNRLNYFVGGKTYNLAHYTKEMYLL--GYLARDNKVYLADREVH----VYGY-----EISLEFQTLTLRGEIEEAIENVLPNVEG----KDSLTKIARFLEGQEYDQDQKFELALKVDESAEMKWRALHDLESLFLLHSSFNNKEGLVTLAKDAETTGK--FNLAFNAYWIAIQGAKDLLIKSQR--FSEAAFLGSTYGDNEVNDIVTKWKENLILNGKNTVSERVEGLP----------------------
9	PROSPECT2	3a6pA1	0.080	0.742	1.403	threading_9	--------AMDQVNALCEQLVKAVTVM------------------------------MDPNSTQRYRLEALKFCEEFKEKCPICVPCGLRLAEKTQVAILEHVVKFRWNGMSRLEKVYKNSVMELIANGTLNILEEENHIKDAL--------------------------SRIVVEMIKREWPQHWPDMLIELDTLSTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSF---------------------------------------LLNTLQENVNKYQQ-----VKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSHITAENC--------------KLLEILCLLLNEQ------ELQLGAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALL--GADSDVETPSNFGKYLESFLAFTTHPRSSTQMTWGALFRHEILSRDPLLLAIIPKYLRASMTNLVSKTDSPSCEYSRFDFDSDEDFNAFFN---------------------SSRAQQGEVMRLAEWLKYQLSTF
10	PPA-I	3boaA	0.090	0.701	0.692	threading_10	M------------APEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPAVAVVADLPAYLANETFVTPVIVQSGKIDADFNATFYSMANKHFNDYDF-----VSAENADDDFKLSIYLPSAMDEPV--------VYNGKKADIADADVFEKWLQVEALPYFGEIDGSVFAQYVESGLPLGDEEELEEYKPLFTELAKKNRGLMNFVSIDARLNMKEQFPLFAIHDMTEDLKYGLPQLSEEASKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFVGKNHDEIVNDPKKDVLVLYYAPW-------CGHCKRLAPTYQELADTYANATSDIAKLDHTEEGYPTIVLYPGG----KKSESVVYQGSRSLDSLFDFIKENGHFDVDGKALYEEAQEKAAEEADADAELAD-------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.891 to 1b3uA SCOP code=a.118.1.2	TM-score=0.643 to 2vglB SCOP code=i.23.1.1	TM-score=0.462 to 2c0mC SCOP code=a.118.8.1	TM-score=0.860 to 2ooeA SCOP code=a.118.8.7	TM-score=0.593 to 1qgkA SCOP code=a.118.1.1