Template-based Modeling Results for YCAL_ECOLI

Submitted Primary Sequence

>Length 254
MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK
43211100000000000100211312322222221132112110232102110220022123223212312300210130021003304222010100112300010012000000100021011310100000000100111012102200011002100000001002102110010020012041123211101200010023210012000100210131332413110110111230022022213425
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNTKLLLAIATSAALLTGCQNTHGIDTNMAISSGLNAYKAATLSDADAKAIANQGCAEMDSGNQVASKSSKYGKRLAKIAKALGNNINGTPVNYKVYMTSDVNAWAMANGCVRVYSGLMDMMNDNEIEGVLGHELGHVALGHSLAEMKASYAIVAARDAISATSGVASQLSRSQLGDIAEGAINAKYSRDKESEADDFSFDLLKKRGISTQGLVGSFETLASLDGGRTQSMFDSHPPSTERAQHIRDRIASGK
1	MUSTER	3c37A	0.264	0.760	2.084	threading_1	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLG---DNLAQLAGQLFGKA------GSYSREYENQADFLGVETY-KAGYNPNGLTSFFQKLNA-----------THPLTSERIQRVQAEIAKLP
2	SPARKS	3c37a	0.249	0.760	4.597	threading_2	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLGDNLAQLAGQLFGKA---------GSYSREYENQADFLGVE-TYKAGYNPNGLTSFFQKLN-----------ATHPLTSERIQRVQAEIAKLP
3	PROSPECT2	3c37A	0.249	0.760	2.493	threading_3	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPVN-DPEVQRYVDKVGKRLLSGAVEFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLGDNL---------AQLAGQLFGKAGSYSREYENQADFLGVETY-KAGYNPNGLTSFFQKL-----------NATHPLTSERIQRVQAEIAKLE
4	PPA-I	3c37A	0.249	0.760	2.267	threading_4	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLGDNLAQLAGQLFGKA---------GSYSREYENQADFLGVETY-KAGYNPNGLTSFFQKLNA-----------THPLTSERIQRVQAEIAKLP
5	HHPRED-l	3c37_A	0.277	0.752	8.269	threading_5	--------------------------------------KGFN-ISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQ-TQEYGY---SLVLSLVLGDN----LAQAGQLFGKAG--SYSREYENQADFLGVET-YKAGYNPNGLTSFFQKLNA-----------THPLTSERIQRVQAEIAKL-
6	HHPRED-g	3c37_A	0.276	0.756	9.292	threading_6	--------------------------------------KGFN-ISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQ-TQEY--GYSL-VLSLVLGD---LAQL-AGQLFGKAG--SYSREYENQADFLGVET-YKAGYNPNGLTSFFQKLNA-----------THPLTSERIQRVQAEIAKLP
7	SP3	3c37a	0.264	0.760	4.885	threading_7	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQPV-NDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLGDNL---AQLAGQLFGKA------GSYSREYENQADFLGVE-TYKAGYNPNGLTSFFQKL-----------NATHPLTSERIQRVQAEIAKLP
8	SAM-T99	3c37A	0.254	0.760	6.829	threading_8	---------------------------------------KGFNISIEQEKELGNKFAVEIEKQQQ-PVNDPEVQRYVDKVGKRLLSGAREFDYVFKVVKDDSVNAFAIPGGRVYVHTGLLKAANETELAGVLAHEINHAVARHGTRQTQEYGYSLVLSLVLGDNLAQLAGQLFGKAG---------SYSREYENQADFLGVET-YKAGYNPNGLTSFFQKLN-----------ATHPLTSERIQRVQAEIAKLP
9	MUSTER	1t5jA	0.124	0.984	0.646	threading_9	LVKMRDKILGSVFGAVIGDAMPTENLTKEEISYVEPKNYLAGKLNKGEWTDDTEQAICLIKSLTKEGIDIKKFANCLIAWKNKNPPDIGLTSLMAKLENNDYSGVDSSSGAAMRIYPLGIVFHNNLKKLKEEVIKASKIT--HNNKTAIAGALAIAFFVSSALKDRKDFSLLDECYNYIEEFAKKLLEIKNLDYIYDYFTDEVVPSAGGDTDSLASMYGAMAGAYKNIPKEWIDGLKNKFELAERLYHLATE--
10	SPARKS	3cqba	0.245	0.370	1.395	threading_10	----------------------------------------------------NASKGALRSVGGVIESPRNETEHWLLETVGRQAQQA-GIGPTVAIYDSADINAFATKDSLVAVSTGLLH-NTRDEAEAVLAHEVSHIANGDVT-TLQ---------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.443 to 1xm5A SCOP code=d.92.1.15	TM-score=0.435 to 1oz9A SCOP code=d.92.1.15	TM-score=0.444 to 1xm5A SCOP code=d.92.1.15	TM-score=0.447 to 1xm5A SCOP code=d.92.1.15	TM-score=0.426 to 1tviA SCOP code=d.92.1.15