Template-based Modeling Results for YCAK_ECOLI

Submitted Primary Sequence

>Length 196
MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHCHHHCCCCCCCCHHHHHHHHHHHHCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL
5641100000001333111110020003202434120100001222121101231123123234322330120011023010000000001010000020001100210001122331321201000001022311132112320020021002101021010000021221313211121032002202201343
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYRRNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYIDRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIEDADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL
1	MUSTER	3lcmA	0.235	0.934	2.576	threading_1	---MKILIVYTHPNPTSFNAEILKQVQTNLSK-EHTVSTLDLYAEHFDPVLQFNETHK--RRDLAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKHLQGKSAWIITTHNTPSFAMPF--VQDYGKVLKKQILKPCAISPVKLTELTSIEKIS-----DDERQKLLHKVAQITRNI
2	SPARKS	3lcma	0.235	0.934	3.459	threading_2	---MKILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRR--DLAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKHLQGKSAWIITTHNTPSFAMPFVQDYG--KVLKKQILKPCAISPVKLTELTSIEKIS-----DDERQKLLHKVAQITRNI
3	PROSPECT2	3lcmA	0.240	0.934	3.122	threading_3	M---KILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRD--LAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKVLQGKSAWIITTHNTPSFAMPFVQDYG--KVLKKQILKPCAISPVKLTELTSIEKISDDE-----RQKLLHKVAQITRNI
4	PPA-I	3lcmA	0.230	0.934	3.114	threading_4	---MKILIVYTHPNPTSFNAEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRD--LAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKKHLQGKSAWIITTHNTPSFAMPFVQDYG--KVLKKQILKPCAISPVKLTELTSIEKIS-----DDERQKLLHKVAQITRNI
5	HHPRED-l	1d4a_A	0.212	0.964	3.213	threading_5	-VGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAGPFRSKKAVLSITTGGSGSMYSLQGIHGILWPIQSGILHFCGFQVLEPQLTYSIGHTP-----ADARIQILEGWKKRLEN-
6	HHPRED-g	1d4a_A	0.211	0.969	4.265	threading_6	-VGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAGPFRSKKAVLSITTGGSGSMYSLQGIHGDMNVILSGILHFCGFQVLEPQLTYSIGHTPAD-----ARIQILEGWKKRLENI
7	SP3	3lcma	0.235	0.934	3.723	threading_7	---MKILIVYTHPNPTSFNAEILKQVQTNLS-KEHTVSTLDLYAEHFDPVLQFNETHKRR--DLAKVAEMEKYRDLVTWADHLIFIFPIWWSGMPAILKGFIDRVFVADFAYSYKGHLQGKSAWIITTHNTPSFAMPFVQDYG--KVLKKQILKPCAISPVKLTELTSIEKIS-----DDERQKLLHKVAQITRNI
8	SAM-T99	1sg0A	0.216	0.990	4.626	threading_8	-AGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFGDSGLLQGKLALLSVTTGGTAEMYTKTGVNGDFLWPLHGTLHFCGFKVLAPQISFAPEI-ASEEERKGMVAAWSQRLQTIWKEE
9	MUSTER	1sg0A	0.195	0.969	2.314	threading_9	-AGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGLLQGKLALLSVTTGGTAEMYTKTGVNGFLWPLQHGTLHFCGFKVLAPQISFAPEIAS-----EEERKGMVAAWSQRLQTI
10	SPARKS	1sg0a	0.200	0.969	3.158	threading_10	-AGKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGLLQGKLALLSVTTGGTAEMYTKTGVNGDSRYFLWPLLHFCGFKVLAPQISFAPEIAS-----EEERKGMVAAWSQRLQTI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.812 to 1sg0A SCOP code=c.23.5.3	TM-score=0.814 to 1sg0A SCOP code=c.23.5.3	TM-score=0.814 to 1sg0A SCOP code=c.23.5.3	TM-score=0.799 to 1sg0A SCOP code=c.23.5.3	TM-score=0.813 to 1sg0A SCOP code=c.23.5.3