Template-based Modeling Results for YCAI_ECOLI

Submitted Primary Sequence

>Length 754
MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEEEEEEECCEEEECCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCHHHHHHHCCEEEEECCCCCCCCCHHHCCCEEEECCEEEEEECCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEECCEEEEEEEECCCCCCHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
4512000000000000000013011000000000000000001010010000000000000000210011032122222201020111332211101012133220111000001032223202201100020102102132131100000000123110001001000022112002200200231032221100000001023221233012103200000000000000000000000001002111212121100000000000000010020211001000000000002102231100000000000000000100011100000000000000021011021102100200010000000000000000001011000000001000000010000000000000100011001100100001000000100310230212012011000000000000010000200000000000000111133132320100001022010000113220000000311232220120001102223130100000122221210031003202101011123233222013121011210201001123223342232100010011300000002021211120023123303010010022103211121002302020000001321224010320021034220200101330200010123102010013311121001101222344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKITTVGVCIISGIFPLLILPQLPGTLTLAFLTLFACVLAFIPVKTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQGRRIFPASGLVMYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPLTGRFLQASVIEPNCSLRAQYLASLQTTLQPYPWNAVILGLGMGERLSVPKEIKNIMRDTGTAHLMAISGLHIAFAALLAAGLIRSGQIFLPGRWIHWQIPLIGGICCAAFYAWLTGMQPPALRTMVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAVAALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANLLAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLPEGWINIAECWQWLSFSPWFLLVVWRLNAWRTLPAMCVAGGLLMCWPLWQKPRPDEWQLYMLDVGQGLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGLDSILHIWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSAHWPLQGSNDKGNNHSCVVKVDDGTNSILLTGDIEAPAEQKMLSRYWQQVQATLLQVPHHGSNTSSSLPLIQRVNGKVALASASRYNAWRLPSNKVKHRYQLQGYQWIDTPHQGQTTVNFSAQGWRISSLREQILPRWYHQWFGVPVDNG
1	MUSTER	2bibA1	0.154	0.326	1.197	threading_1	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGDAIILESNGHFAMVDTGEDYDFKHVLTDRVFRRLKELSVKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSGDAHFQFGDMDIQLYNYENETDSSGNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGP-LIGKVDLMKFNHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKDYDATVFDIRFVNISTSYKPIPS--------------
2	PROSPECT2	3a0oA	0.086	0.847	2.517	threading_2	PTENPPRFSWL-------------------------------------------------------------PDIDDGARYVLRISTDPGFTDKKTLVFEDLAWNFFTPDEALWDQKSATAHSNWSTVRSFEI-----SEALPKTPLPGRSARHAAAQT------SHPRLWLNSEQLSAFADAVAKDPNHCGWAEFYEKSVTRVATLWRQMYIDCQEVIYAIRHLAIAGRLLDASRKWLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMT--GMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLPALAVFDDIGWATIQKDMEDPDRHLQFVFKSSPQNAFVLYAHGEDLAIQSGYYVAFNSQMHLNWRRQTRSKNA----VLIGGKGQYAEKDKALARRAAGRIVSVEEQPGHVATAAYQVANPLVQKVLRETHF--------VNDSYFVIEVECSEPQCHTLGAPQTGRSSFRYNGRKAGFYGQFVYSSGGTGFPDIDPKEFEGLDIHHHVCATVPAATLKEP----------KRIFSFIDDQGFSTDIYFSDERFKLSLPK-------------------
3	MUSTER	3a0oA	0.110	0.854	1.121	threading_3	------------------------------------------------------------------LTIGYEPSEEAQPTEFSWLPDIDDGARYVLRISTDPGTLVFEDLAWNFFTPDEA--LPDG-HYHWCYALWDQKSATAHSNWTVRSFEISEALPKTPLPGRSARHAAAQTLNSEQLSAFADAVAKDPNHCGWAEFYEKSRPVMPQMYIDCQEVIYAIRHLAIAGRVLDDLLDASRKWLLAVAAWATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVAHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPWAGTDGGWAEG--PHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPLYTKAPGTRRANFGGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLPALAWATIQKDMEDPDRHLQFVFKSSPYGSAFVLYAHGEDLAIQSGYYVAFNSQMHLNWR-----RQTRSKNAVLIGGKGQYAEKDKALARRA-AGRIVSVEEQPGHVRIVQVANPLVQKVLRETHFV--------NDSYFVIVDEVEELQWLCHTLGAPQTGRSSFRYNGRKAGFYGQFVYSSGGTPQISAEGFPDIDPKCATVPAATRHRL-VPYSL-----EPKRIFSFIDDQGFSTDIYFSDERFKLSLPK-------------------
4	SPARKS	2biba	0.158	0.345	3.094	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGGAIILESNGHFAMVDTGEDYDFPDVLTDRVFRRLKELSVKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSEDAHFQFGDMDIQLYNYENETDSSGNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYG-PLIGKVDLMKFHHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKDYDATVFDIRKDGFVNISTSYKPIWHKSAYGNPDSTG
5	PPA-I	2bibA1	0.150	0.328	1.787	threading_5	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGGAIILESNGHFAMVDTGEDYSYKHVLTDRVFRRLKELSVKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRITNSEDAHFQFGDMDIQLYNYENEKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPL-IGKVDLMKFNHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKDYTVFDIRKDGFVNISTSYKPIPS-------------
6	PROSPECT2	2bkuB	0.074	0.874	2.132	threading_6	MSTAEFFLQFAGLSSQVLIDENTKLEGRILAALTLKRWITQVSPEAKNQIKTNALTALAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRAS-----------LLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADS-----LIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAAARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIELKALNQVDSPVSISNSLEEDFLAQMISNPNARRELKPAVLSVFGD--------IASNIGADFIPYLNDIMALC---------------------------------------VAAQNTKP---------------ENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTI---FQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSI--------------KQFYGQDWVIDYIRSGQLFS
7	HHPRED-l	2bib_A	0.151	0.342	6.267	threading_7	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGDAIILESNGHFAMVDTGEDYDYKHVLTDRVFRRLKELSVKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRNITQGDAHFQFGDMDIQLYNYENETIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGP-LIGKVDLMKFNHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINADYDATV-FDIRKDGVNISTSYKPIPSGWHKSAQGEYAVE-
8	MUSTER	3ea5B	0.095	0.936	1.069	threading_8	SQVLILEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVPRIANAAAQLIAAIADIELPHGAKIMVDNTGAEQPENVKRAS-------LLALGYMCESADPQSQVSSSNNILIAIVQG-----QSTETSKAVRLAALN---ALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKTFMKPYMEQALYAL-TIATMKSPNDKVASMTVEFWSTICEEEIDIPLQSYNFALSSIKDVVPNLLNLLTRQNEDPNVSMSAGACLQLFAQNCGNHI---------LEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDQRTYYVHQALPSILNLMLQVKETTAWCIGRIADSVASIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAPIYNFYPALVDGLIGAANRIDNEFNA--RASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVL-----AAVIRKSPS-SVEPVADMLMGLFFRLLEKKDSAFI----EDDVFYAISALAASLGKGEKYLETFSPYLLKALNQVDSPVSITAVGFIASLEEDFRRYSDAMMNVLAQMISNP---NARRELSVFGDIASNIGADFIPYIMALCVAAQNTKPALDYQIKV--LEAVLDAGLHDKPEAPYGTIFQFIAQVDPQLYSEDATGDIAAMFPDGSI------KQFYGQWVIDYIKRTRSGQ
9	HHPRED-g	2bib_A	0.138	0.337	5.408	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGDAIILESNGHFAMVDTGEDYDFKHVLTDRVFRRLKELSVQLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSQNITQGDAHFQFGDMDIQLYNYENETDWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGP-LIGKVDLMKFNHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKATV-FDI-RKDGFVNWHKSAYGN-WW--YQAP-DSTG
10	SP3	2biba	0.154	0.345	1.767	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QESSGNKIHFINVQEGGSIILESNGHFAMVDTGEDYDFPDVLTDRVFRRLKELSVKLDFILVTHTHSDHIGNVDELLSTYPVDRVYLKKYSDSRIITQGDAHFQFGDMDIQLYNYENETDSSGNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYG-PLIGKVDLMKFNHHDTNKSNTKDFIKNLSPSLIVQTSDSLPWKNGVDSEYVNWLKERGIERINAASKDYDATVFDIRKDGFVNISTSYKPIWHKWWYQAPDSTG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.549 to 2bibA SCOP code=b.109.1.1	TM-score=0.565 to 1n7qA SCOP code=a.102.3.2	TM-score=0.554 to 2bibA SCOP code=b.109.1.1	TM-score=0.554 to 1rw9A SCOP code=a.102.3.2	TM-score=0.555 to 2bibA SCOP code=b.109.1.1