Template-based Modeling Results for YCAC_ECOLI

Submitted Primary Sequence

>Length 208
MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK
CCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK
5533223124310000000112000211331313200200100020032141200000103322313103202320232210022110101223200300332222100000010200000000101331010000120011123201200011023100200001000010032132303100200232022131002012122544
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSFETGPNGPLVPELKAQFPDTPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRLSQAGAQLMTWFGVACELHRDWRNDIEGLATLFSNHIPDYRNLMTSYDTLTKQK
1	MUSTER	1yacA	0.980	0.981	3.288	threading_1	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
2	SPARKS	1yaca	0.980	0.981	4.455	threading_2	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
3	PROSPECT2	1yaca	0.975	0.981	3.405	threading_3	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTL---T
4	PPA-I	1yacA	0.980	0.981	3.507	threading_4	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
5	HHPRED-l	1yac_A	0.980	0.981	4.406	threading_5	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
6	HHPRED-g	1yac_A	0.980	0.981	4.488	threading_6	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
7	SP3	1yaca	0.980	0.981	4.602	threading_7	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
8	SAM-T99	1yacA	0.980	0.981	4.980	threading_8	-TKPYVRLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETGPNGPLVPELKAQFPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRDWRNDIAGLATLFSNHIPDYRNLMTSYDTLT---
9	MUSTER	1yzvA	0.154	0.904	2.300	threading_9	-SRLLKHYGSCKTAFFCCDIQEKFMGRIA--NSANCVFVANRFAGLHTALGTAYIVTEQYPKGL-GATSADI-RLPPDAHVF-SKKRFAML-VPQVMPLVDLPEVEQVVLWGFETHVCILQTAAALLDMKKKVVIAVDGCGSQSQGDHCTAIQLMQSWGCYISTSESILMQLLKDASDPFKTIAPLMKQTHP-IRI------------
10	SPARKS	2b34a	0.241	0.918	3.612	threading_10	-----ARINPTNSALFVCDLQEKFASNIKY--FPEIITTSRRLIDAARILSIPTIVTEQYPKGL-GHTVPTLKEGLAENTPIFDKTKFSMC-IPPTEDTLKK--VQNVILVGIEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHTDRHFAFKQMEQAGAILTTSEATILGLVGGSDHPFKEVQKLILTSAPDTGLVPLSKL------

Predicted Tertiary Structure


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TM-score=0.988 to 1yacA TM-score=0.997 to native SCOP code=c.33.1.3	TM-score=0.988 to 1yacA TM-score=0.998 to native SCOP code=c.33.1.3	TM-score=0.988 to 1yacA TM-score=0.998 to native SCOP code=c.33.1.3	TM-score=0.986 to 1yacA TM-score=0.995 to native SCOP code=c.33.1.3	TM-score=0.988 to 1yacA TM-score=0.997 to native SCOP code=c.33.1.3

Experimental Structure

Download 1yacA

SCOP code=c.33.1.3