Template-based Modeling Results for YBJT_ECOLI

Submitted Primary Sequence

>Length 476
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHCCCCCCCCEEEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
55120001000020011002101532120000011233124232220100200012131011102401000000101132221211112001100200341302000000003123333031120220002003313020000100000112120020001002201011113223140100002000200010032222322001001121010210021002102332200100110110001002001212220122002013231102221023103231010220021003212422322211220311141213112123320010212011210020013000322100000001010001200123112221223203202001001011023321000001130211010101022424222010100000300000000000000000001000210021124235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVPVKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMRDMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQFEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTALRALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKTSASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVDSWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWLLMIPAHLFIFRGMAKQIARLAEQSTD
1	MUSTER	2jl1A	0.192	0.590	1.343	threading_1	FS--IAVTGATGQLGGLVIQHLLKKASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESIIPLAHVHLATEYAIRTTNIPYTFLRNALYT--DFFVNEGLRASTESGAIVTNAG--SGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVS--FEEEKNFLVNA--GVPEPFTEITAAIYDGEASKTSDDLQKLIG-SLTPLKETVKQALKM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	SP3	1z45a	0.166	0.912	2.061	threading_2	-SKIVLVTGGAGYIGSHTVVELIENGYDCVVATYSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKKIDSVIHFAGLTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATRFPNMINPYGHTKYAIENILNDLYWKFAILRYFNPIGPNNLLPYMAQVAVGRREKLYIFRDGTPIRDYIHVVDLAKGHIAALQYLEAYNREWNLGSGKGSTVFEVYHAFCKASGIDLPY---------------------------------VLNLTAKPDRAKRELKWQTLQVEDSCKDLWKWTTENPF---GYQLRGVEARFSAEDMRYDAGTRFQATF-ANLGASIVDLKVLGYENGYYIGATIGRYANRISKLCNKQLTVNN-GVNANHSSGSFHRFLGPIIQNPSEYMLIDDTEFPGLVTIQYTVNVAQKSLEIVYKGKATPINLTNHSYFNLNKPYGDTIEGTEIM-V--RSKKSVD
3	SPARKS	2jl1a	0.182	0.599	2.351	threading_3	--FSIAVTGATGQLGGLVIQHLLKKASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDF---FVNEGLRASTESGAIVTN-AGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALKM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	2gasA	0.126	0.601	2.492	threading_4	TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVICAAGRL---------LIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDQVFEEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNKAVHIRLPKYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQIKGDAVYEIDPAASEAYPDVTYTTADEYLNQFV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5	PPA-I	2jl1A	0.193	0.599	1.890	threading_5	--FSIAVTGATGQLGGLVIQHLLKKASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESIIPLAHVHLATEYAIRTTNIPYTFLRNA--LYTDFFVNEGLRASTESGAIVTNAGS--GIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALKM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	HHPRED-l	2c5a_A	0.169	0.634	1.416	threading_6	PSEKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEPQDAFGLEKLATEELCKDFGIECRIGRFHNIYGPFGTWAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE------------------------GVR-GRNSDNNLIKEKLGWPNMRLKEGLRITYFWIKEQIDVSLYGSSKVV-GTQAPVQLGSLRAADG--------------------------------------------------------------------------------------------------------------------------------------------------
7	HHPRED-g	2x4g_A	0.168	0.576	1.281	threading_7	AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFS--------EEVASALGQTNPFYAACLQARVPRILYVGSAYAMPPQKSSYVLCKWALDEQARENGLPVVIGIPGMVLGELDGTGRVITAIGNGEMTHY----VAGQRNVIDAAEAGRGLLMALERGRI-GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATL----------------EVMAGGQFLDGRKAREELGFSTTALDDTLLRAIDWFRDNGYFN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SP3	2jl1a	0.182	0.599	2.420	threading_8	--FSIAVTGATGQLGGLVIQHLLKKASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYD----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAE-ESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDF---FVNEGLRASTESGAIVTN-AGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALKM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SAM-T99	2c5aA	0.178	0.565	2.084	threading_9	---KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGNIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEPQDAFGLEKLATEELCKHFGIECRIGRFHNIYGP----FGTWKGGREKAPAAFCWGDGLQTRSFTFIDECVEGVLRLTKSD--FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNL-------------------------IKEKLGWAPMRLKEGLRITYFWIKEQIE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	MUSTER	2zcvA	0.167	0.590	1.324	threading_10	M---IAITGATGQLGHYVIESLMKTASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ------RAPQHRNVINAAKAAGVKFIAYTSLLHADTSP-LGLADEHIETEKMLADSGIVYTLLRNGWYS---ENYLASAPAALEHGVFIGAAG--DGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.635 to 1qydA SCOP code=c.2.1.2	TM-score=0.721 to 1z45A SCOP code=b.30.5.4	TM-score=0.635 to 1qydA SCOP code=c.2.1.2	TM-score=0.637 to 1qydA SCOP code=c.2.1.2	TM-score=0.747 to 1qycA SCOP code=c.2.1.2