Template-based Modeling Results for YBJG_ECOLI


  Submitted Primary Sequence

>Length 198
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
223100100000012112101100000000020000000000000001012111100010000000000001000100213201132201201221222100020000000000000001110000000000000000000000000000000000000000000000210021012101100110001004211244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAVVLWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFPSDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIGCLSAQIIWQAMGHKLYQRLQSWYRVCFALPIRKGWVRD
1MUSTER2akcB0.1630.9291.590threading_1PAFRYDKEAYFKGYAIKGS-PRWKQAAEDADISVENIARIFSPVV-ISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPEDKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELND----------KNNLLS-
2SPARKS2a96a0.1620.9343.106threading_2PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPERKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELNDKNNLL------------
3PROSPECT21d2ta0.1330.9142.189threading_3GAFLNDQAMYEQGRLL--RNTERGKLAAEDANLSSGGVANAFSGAFITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTQSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQH--------------QK
4PPA-I2akcB0.1610.9391.567threading_4PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVGAISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPEDKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQPAFQKSLAKVREELNDKNNLLS-----------
5HHPRED-l2ipb_A0.1450.9395.204threading_5PAFRYDKEAYFKGYAIKG-SPRWKQA-AEDADISVNIARIFSPVVAKINPKDTPETWNMLNLLKMGGYYATASAKKYYMRTRPFVLFNHSTCRTLRKDGSYPSGHDAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARL------QTIPAFQKSLAKVREEL--NDKNNLLS-
6HHPRED-g1d2t_A0.1320.9195.675threading_6IAFLNDQAMYEQGRLL--RNTERGKLAAEDANLSSGGVANASGAFGSPITEKD-APALHKLLTNMIDDLATRSAKDHYMRIRPFAFYGVSTCDKLSKNGSYPSGHTSIGWATALVLAEINPQ-RQNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLH--T----NPAFQQQLQKAKAEFAQHQK------
7SP32a96a0.1550.9442.825threading_7PAFRYDKEAYFKGYAIKGSPRWKQAAEDADISVENIARIFSPVVAKISPKDTPETWNMLQNLLKVGGYYATASAKKYYMRTRPFVLFNHSTCRPERKDGSYPSGHTAYSTLLALVLSQARPER-AQELARRGWEFGQSRVICGAHWQSDVDAGRYVGAVEFARLQT---------IPAFQKSLAKVREELNDKNNLL-
8SAM-T991eoiA0.1330.8332.611threading_8------------------RNTERGKLAAEDANLSSGGVANAFSGAFGSPITEKDAPALHKLLTNMIGDLATRSAKDHYMRIRPFAFYGVSTCNKLSKNGSYPSGHTSIGWATALVLAEINPQ-RQNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHTNPAFQQQLQKAKAEFAQH--------------
9MUSTER1eoiA0.1340.9041.489threading_9IAFLNDQAMYEQGRLLRNT--ERGKLAAEDANLSSGGVANAFSGAFITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTTEKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQH----------------
10SPARKS1d2ta0.1210.9193.065threading_10IAFLNDQAMYEQGRLLRN-TERGKLAAEDANLSSGGVANAFSGAFGITEKDAPALHKLLTNMIEDAGDLATRSAKDHYMRIRPFAFYGVSTCNTQSKNGSYPSGHTSIGWATALVLAEINPQR-QNEILKRGYELGQSRVICGYHWQSDVDAARVVGSAVVATLHPAFQQQLQKAKAEFAQHQK--------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.817 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.834 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.817 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.812 to 1eoiA
SCOP code=a.111.1.1
TM-score=0.823 to 1eoiA
SCOP code=a.111.1.1