Template-based Modeling Results for YBIC_ECOLI


  Submitted Primary Sequence

>Length 361
MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLAS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLAS
CCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLAS
5542220213101200110043020333103100100000211112110000011002112313122322020123110000010220001000110011002103412000000100100020010010002210000000011111100113132221000000000014432100000000000001021023222301200001332121210210131121011212302000000000000000011211232223222321210000000003001132012102200210321323432200011122121222135320301210021012004402033310220023135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAGHDSHGIGMIPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAMALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGMPEETLQAFCQQLAS
1MUSTER1z2iA0.2800.9582.998threading_1---TVLARLDELERFCRAVFLAVGTDEETADAATRAMMHGTRLGVDSHGVRLLAHYVTALEGGRLNRRPQISRVSGFGAVETIDADHAHGARATYAAMENAMALAEKFGIGAVAIRNSSHFGPAGAYALEAARQGYIGLAFCN--SDSFVRLHDGAMRFHGTNPIAVGVPAADDMPWLLDMATSAVPYNRVLLYRSLGQQLPQGVASDGDGVDTRDPNAV--EMLAPVGGEFGFKGAALAGVVEIFSAVLTGMRLSFDLAPMGGPDFRGLGAFVLALKPEAFLEDVFDESMKRYLEVLRGSPAREDCKVMAPGDREWAVAAKREREGAPVDPVTRAAFSELAEKFSVSPPTYH--------
2SPARKS1z2ia0.2800.9586.061threading_2---TVLARLDELERFCRAVFLAVGTDEETADAATRAMMHGTRLGVDSHGVRLLAHYVTALEGGRLNRRPQISRVSGFGAVETIDADHAHGARATYAAMENAMALAEKFGIGAVAIRNSSHFGPAGAYALEAARQGYIGLAFCN--SDSFVRLHDGAMRFHGTNPIAVGVPAADDMPWLLDMATSAVPYNRVLLYRSLGQQLPQGVASDGDGVDTRDPNAV--EMLAPVGGEFGFKGAALAGVVEIFSAVLTGMRLSFDLAPMGGPDFRGLGAFVLALKPEAFLEDVFDESMKRYLEVLRGSPAREDCKVMAPGDREWAVAAKREREGAPVDPVTRAAFSELAEKFSVSPPTYH--------
3PROSPECT21z2iA0.2830.9504.707threading_3---TVLARLDELERFCRAVFLAVGTDEETADAATRAMMHGTRLGVDSHGVRLLAHYVTALEGGRLNRRPQISRVSGFGAVETIDADHAHGARATYAAMENAMALAEKFGIGAVAIRNSSHFGPAGAYALEAARQGYIGLAFCN--SDSFVRLHDGAMRFHGTNPIAVGVPAADDMPWLLDMATSAVPYNRVLLYRSLGQQLPQGVASDGDGVDTRDP-----NAVEMLAPVGGFKGAALAGVVEIFSAVLTGMRLSFDLAPMGGPDFSTPGAFVLALKPEAFLEDVFDESMKRYLEVLRGSPAREDCKVMAPGDREWAVAAKREREGAPVDPVTRAAFSELAEKFSVSPPTY--------H
4PPA-I1z2iA0.2800.9584.478threading_4---TVLARLDELERFCRAVFLAVGTDEETADAATRAMMHGTRLGVDSHGVRLLAHYVTALEGGRLNRRPQISRVSGFGAVETIDADHAHGARATYAAMENAMALAEKFGIGAVAIRNSSHFGPAGAYALEAARQGYIGLAFCN--SDSFVRLHDGAMRFHGTNPIAVGVPAADDMPWLLDMATSAVPYNRVLLYRSLGQQLPQGVASDGDGVDTRDPNAV--EMLAPVGGEFGFKGAALAGVVEIFSAVLTGMRLSFDLAPMGGPDFRGLGAFVLALKPEAFLEDVFDESMKRYLEVLRGSPAREDCKVMAPGDREWAVAAKREREGAPVDPVTRAAFSELAEKFSVSPPTYH--------
5HHPRED-l2g8y_A0.9970.9705.021threading_5--SGHRFDAQTLHSFIQAVFRQ-GSEEQEAKLVADHLIAANLAGHDSHGIG-FPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEA-ALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIP-VAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAV-QESPLGSLLTFAEHKGYALAA-CEILGGALSGGKTTHQETLQTSPDAILNC-TTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIG-PEETLQAFCQQLA-
6HHPRED-g2g8y_A0.9970.9724.036threading_6--SGHRFDAQTLHSFIQAVFRQ-GSEEQEAKLVADHLIAANLAGHDSHGIG-FPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEA-ALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIP-VAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAV-QESPLGSLLTFAEHKGYALAA-CEILGGALSGGKTTHQETLQTSPDAILNC-TTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIG-PEETLQAFCQQLAS
7SP32g8ya0.9600.9726.102threading_7--SGHRFDAQTLHSFIQAVFR-QGSEEQEAKLVADHLIAANLAGHDSHGI-GFPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAFGQVAAHEAA-LGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIP-VAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVQE-SPLGSLLTFAEHKGYALA-ACEILGGALSGGKTTHQETLQTSP-DAILNCTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGP-EETLQAFCQQLAS
8SAM-T991x0aA0.3120.9314.965threading_8----MRWRADFLSAWAEALLRKAGADEPSAKAVAWALVEADLRGVGSHGLLRLPVYVRRLEAGLVNPSPTLP-LEERGPVALLDGEHGFGPRVALKAVEAAQSLARRHGLGAVGVRRSTHFGMAGLYAEKLAREGFVAWVTTNAE--PDVVPFGGREKALGTNPLAFAAPAPQG-ILVADLATSESAMGKVFLAREKGERIPPSWGVDREGSPTDDPHRV-----YALRPLGGPKGYALALLVEVLSGVLTGAGVAHGIGRMYDDRPQDVGHFLLALDPGRFVGKEFLERMGALWQALKATPPAPGEEVFLPGELEARRRERALAEGMALPERVVAELKALGERYGVPW------------
9MUSTER2g8yA0.9430.9722.993threading_9--SGHRFDAQTLHSFIQAVFRQ-GSEEQEAKLVADHLIAANLAGHDSHGI-GFPSYVRSWSQGHLQINHHAKTVKEAGAAVTLDGDRAF-GQVAAHEAALGIEKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVG-IPVAPFHGRDSRFGTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPAVQE-SPLGSLLTFAEHKGYALAA-CEILGGALSGGKTTHQETLQTSP-DAILNCTTIIINPELFGAPDCNAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQKQGIPLDAGSWQAICDAARQIGP-EETLQAFCQQLAS
10SPARKS3i0pa0.2620.9615.934threading_10--QTKNVSIDTIKEFMYQVLLKVGSDEENARMVRDTLIAADLRGMDTHGIQRFKVYIDRIKKGMINPTAKPSIIRETSTTCVLDGNNGFGHVNGTIGMKMAIEKAKKYGMGMVVVRNSTHFGIAGYYSLLAAQEGCIGICGTN--ARSSVAATFGDEPILGTNPLAIGIPSDEAFPYCFDGATSISPTGRFEKYVRMGKTVDKSWASMKGGKPIEDPKELLENYPGSDEVSGSHKGYCLSEFVEIMSSCLSIANFLNHIEEEKESGKFSLGHFFIAINVECFRDNEFKKNVGDINRTLRNTDLPGHDRIYTAGEKEYETEQKRRKFGDDLPLVTINEMKELSSFYNVPLPF----------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.888 to 1xrhC
TM-score=0.893 to native
SCOP code=c.122.1.1
TM-score=0.881 to 1xrhC
TM-score=0.885 to native
SCOP code=c.122.1.1
TM-score=0.888 to 1xrhC
TM-score=0.893 to native
SCOP code=c.122.1.1
TM-score=0.879 to 1xrhC
TM-score=0.896 to native
SCOP code=c.122.1.1
TM-score=0.888 to 1xrhC
TM-score=0.893 to native
SCOP code=c.122.1.1

  Experimental Structure

Download 2g8yA
SCOP code=c.122.1.1