Template-based Modeling Results for YBHS_ECOLI

Submitted Primary Sequence

>Length 377
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCEEEEEEECCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD
55231111310000002102201312110000000000000000101323133020000123213102200210221320101112133201110331202000000210221033122202000001021110011010102101210112103322322311010101111122000110000000000000000000001002112310111010131220100002000000000000000000000001021300000000000000000000000000012111100100000000000000100011210120020001000010001000000011120110010000000000000000012023325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFGYGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRGLVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQTFEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLSTEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTLGMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFVSTLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD
1	PROSPECT2	1jdha	0.098	0.950	1.577	threading_1	AVVNLIRAQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRT------------MQNTNDVETARCTAGTLHN-------LSHHREGLLAIFKSGGIPALVKMQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILLLWTTSRVLKVLSVCSAGGMQALGLHLTDPSQRLVQNCLWTLRNLSMEGLLGTLVQLINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVDITEPAICALRHLTSRHQEAEMAQNAVRWPLIKATVGLIRNLALCPANHAPLREIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVENIQRVAAGVLCELKEAAEAIEARMS
2	HHPRED-l	3cni_A	0.133	0.358	3.589	threading_2	-----------------------------------------------------QKVAIVREDTGTIAELAEKALG--N-VDIVYGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARL-EIVWYLRGTGSEAVSTGTISSLIESLKVQLASFLLQLLFDPLEIVQHTYLRGSL-FKN-HSPEAI-NVFYSQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	HHPRED-g	3cni_A	0.130	0.347	4.814	threading_3	-----------------------------------------------------QKVAIVREDTGTIAELAEKALG----N-VDIVSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESG-EKARLEIVWYLRGTGLSEAVTGTISSLI-ESLKVQLASFLLALFDPLEIVQHTYLRGSLKN---HSPEAI-NVFYSQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	SAM-T99	3cniA	0.158	0.369	1.171	threading_4	-----------------------------------------------------QKVAIVREDTGTIAELAEKALGN---VDIVAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEK-ARLEIVWYLRGTGLSEAVSGTISSLIESLKVQLA--------------------------------------------------------------------------------------------------------------------------------SFLLNDPKKAQLLFDP-----------------------------------LEIVQHTYLRGSLFKNHSPEAINVFY------------------
5	PROSPECT2	3a6pA1	0.059	0.905	1.565	threading_5	MDQVNALCEQLVKAVTKFCEEFKEKCRHFGLQILEHVVSVMELIANGTLNILEEENHIKDQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQ-----TLPPQRRRDIQQ-------------TLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQ-----------ESKAQANCRVGVAALNTLLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRK-------PLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFIIPKYLRASMTNLVKMGFFNSSRAQQGEVMRLACTSFQMAGEWLKYQLS
6	HHPRED-l	2p0s_A	0.085	0.313	1.399	threading_6	---------------------------------------------------K--TIAIADRTGE-----YEQLFKENDEFRFVAEKTAEEYRK-GAKSGIDAVLEIRQDLE------DPNAV-AIYGYQLPASVSNHISRILSDYLSDKKIASPKQILADSKIELSVHTYKWSE-----TSGELASGIS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7	PROSPECT2	1ee4a	0.093	0.912	1.497	threading_7	QE-------------LPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPQAGVVPVEFMRENQPEMLQLEAAWALTN-----IASGTSAQTKVVVDADAVPLFIQLSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCWSVVSQALPTLAKLIYSM---------DTETLVDACWAISYLSDGPQEAIQAVIDVRIPKR-----LVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVIVLPALRLLLSSPKENIKKEACWTISNIPPLVKLLEVAEDKTKKEACWAISNASIIRYLVSQGCIKPLCDLNRIIEVTLDAL-ENILKMGEADKEARGLNINENADFIEKAGGMEKIKIYEKAYKIIETYF
8	PROSPECT2	1ejlI	0.098	0.920	1.495	threading_8	GTVNWS---------VEDIVKGINSNNLESQLQATQAARKLLS-----REKQPPIDNIIRAGL---IPKFVSFLGKTD--------CSPIQFESAW-----ALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLDAVEQILPTVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLPIVTPALRAIGNIVTGTDEQTQKVIDAGALIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCNLLSAKDTKIIQVILDAISNIFQAAEKASLNLIEKYFS
9	PROSPECT2	1b3ua	0.073	0.984	1.484	threading_9	TFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRVPLVKRLAGGDWFTSRTSACYPRVSSAVKAYFRNLCSDDTPMVRRVLELDNVKSSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDL------VPAFQNLMKDCEAEVRAAASHKVKEFCERENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDCVNEVIGIRQLSQSLLPAIVELAVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMA
10	MUSTER	3g61A1	0.109	0.851	0.688	threading_10	------------------VLTMFRGWLDRLYMLVGTLAAIIHGV-----------LPLM----MLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFA-----------KLEEEMTT----YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKNQEIHDVGELNTRLTDDVSKINE--GIGDKIGMFFQAMATFFGGFIIGFTR-IGQVLTVFFS-VLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSTLLLLAIVPIIAIAGVVEMKMLSGQAL-KDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVF---GITFSFTQAMMYFSYAACFRFGAYLVTQQLMT

Predicted Tertiary Structure


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TM-score=0.559 to 1w63C SCOP code=i.23.1.1	TM-score=0.379 to 1j72A SCOP code=d.109.1.1	TM-score=0.363 to 1a55A SCOP code=c.94.1.1	TM-score=0.372 to 1adyA SCOP code=c.51.1.1	TM-score=0.554 to 1ialA SCOP code=a.118.1.1