Template-based Modeling Results for YBHR_ECOLI

Submitted Primary Sequence

>Length 368
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM
CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM
21310111022101101211211011000000000001100223133020000122113202200320251210111111311320220033430100010022022113213212000001021110021002102200220122113222332322110111112212211100000000000000000000100122220111101101121110000200000000000000000000101212120000000000000000000000000000111210100000000000000000000200120010002000010001000101023020210010000000000000000011023313
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLEVTNATIAIYDEDNGEHSVELTQRFARASAFTHVLLLKSPQEIRPTIDTQKALLLVRFPADFSRKLDTFQTAPLQLILDGRNSNSAQIAANYLQQIVKNYQQELLEGKPKPNNSELVVRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQIFIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISSLCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLKDASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM
1	SPARKS	3cnia	0.167	0.342	1.007	threading_1	-----------------------------------------------QKVAIVREDTGTIAELAEKALGNV---DIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTLSEAVSTGTISSLIESLKVQLASFLLNDPPLEIVQHTYLRPEAINVFYSQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	PROSPECT2	1jdha	0.092	1.000	1.603	threading_2	LLQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETAVKMLGSPVDSVLFYAITTLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITNQESKLIILASGQALVNIMRTYTYEKLLWTTSRVLPAIVEAGGMQALGLHLTDPSQRLVQNCLWATKQEGMEGLLGTLVINVVTCAAGILSNLNKMMVCQVGGIEALVAGDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGQLLYSPIENIQRVAAGVLCELAQDKEAAEAIAVLFRMS
3	HHPRED-l	3cni_A	0.172	0.364	3.519	threading_3	-----------------------------------------------QKVAIVREDTGTIAELAEKALG--N-VDIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTGLSEVSTGTISSLIESLKVQLASFLLLFDPLEIVQHTYLRGSL-FKN-HSPEAI-NVFYSQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1gw5a	0.095	0.948	1.515	threading_4	GMRGLIKRINKELANIRSLDGYSKKKYVCKLLFIFLLGHDIDFGHMEA-VNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASGSREMAEAFAGEIPKILVAGDTM--------------DSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQH----LGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTWLSVKLLRLLQCAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYARSNAQQIVAEMLSYLDTILNLIRIAGDYVSEEVW
5	HHPRED-g	3cni_A	0.169	0.353	4.724	threading_5	-----------------------------------------------QKVAIVREDTGTIAELAEKALG----N-VD-IVSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEIVWYLRGTGLSEAVTGTISSLI-ESLKVQLASFLLFDPLEIVQHTYLRGSL-FKN-HSPEAI-NVFYSQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	3a6pA1	0.076	0.932	1.502	threading_6	LCEQLVKAVTKFCEEFKEKCPICVPCGLVRHFGLQILEHVVKFRWNGMS----RLEKVYLKNSVMELIANGTL----NILEEENHIKDAL----SRIVVEMWPDMLIELDT-------------LSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVAQANCRVGVAALNTLASHITAENCKLLEILCLLLNPLMVLFGDVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFIIPKYLRASMTNLVKMGFFNSSRAQQGEVMRLACRLDPKTSFQMAGEWL
7	HHPRED-l	2p0s_A	0.147	0.315	1.342	threading_7	----------------------------------------------K-TIAIADRTGE-----YEQLFKENDEFRFVHAEKTAEEYRK-GAKSGIDAVLEIRQDLE------DPNAVAIYGYKQPASVSNHISRILSDYLSDKKIASYILADSKIELSVHTYKWSE------SGELASGIS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	PROSPECT2	1ee4a	0.082	0.897	1.482	threading_8	ELPQMTQQLLSATVKFRQHRPPIDVVIQAGVVPRLVEFMR-------------ENQPEMLQLEAAWALTNIAS-------GTSAQTKVVVDADAVPLFIQLGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLC--------RGKKP---------QPDWSVVSQALPTLAKLTLVDACWAISYLAIQAVIDVRIPKRLVEHESTLVQTPALRAVGNIQTQVVINAGVLPALRLLLSSPKENIKKEACWTQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAIIRYLVSQGCIKPLCDLNRIIEVTLDAL-ENILKMGEADKEARGLNINENADFIEKAGGMEKIKIYEKAYKIIETYF
9	HHPRED-g	2p0s_A	0.134	0.304	1.035	threading_9	-----------------------------------------------KTIAIADRTGE-----YEQLFKENDEFRFVHAEKTAEEYRK-GAKSGIDAVLEIRQDLE------DPNAVAIYGYKQPASVSNHISRILSDYLSDKKIASYNIPKSKIELSVHTYKWSE------ASGIS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SAM-T99	3cniA	0.164	0.380	1.170	threading_10	-----------------------------------------------QKVAIVREDTGTIAELAEKALG---NVDIVYAGSDLKEAEEAVKKEKAPAIIVIPKGFSQSLESGEKARLEI-------------------------------------------VWY-----------------------------------------------------------------------------------LRGTGLSEAVSTGTISSLIESLKVQLASFLLNDPKKAQLLFDP----------------------------------EIVQHTYLRGSLFKNHSPEAINVFY------------------

Predicted Tertiary Structure


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TM-score=0.371 to 1th5A SCOP code=d.52.8.1	TM-score=0.655 to 1ialA SCOP code=a.118.1.1	TM-score=0.383 to 1j72A SCOP code=d.109.1.1	TM-score=0.638 to 1w63C SCOP code=i.23.1.1	TM-score=0.374 to 1i6aA SCOP code=c.94.1.1