Template-based Modeling Results for YBHN_ECOLI

Submitted Primary Sequence

>Length 318
MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM
554332313101100000000000000011034011320030033022100000000000000000000000011013302211000000000000100000000000001001311020110020000000010000000000000010220132120232002100000000000001001113322020120202002121000000000010000000000000320200100000000000000111210000010000000123311201000000000000100000000000000100133232433234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKSHPRWRLAKKILTWLFFIAVIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYGCYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTITRIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVDQTTLRILGIGLLMIIAVYLWFCAFAKHRHMTIKGQKLVLPSWKFALAQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVLLVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGTIIAALLAYRVLYYFIPLLLALICYLLLESQAKKLRAKNEAAM
1	SPARKS	2xwub	0.090	0.981	1.069	threading_1	IPLVLGLQEQLRQAVQMETSHGICRIAVALGENH-SRALLDQVEHWQSFLALVNMIMFCTSSLTLTFWYTLQDDILSFE-AEKQAVYQQVYRPVYFQLVDVLLHKAQ-FPSDEEYGFWSKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIAETI---DVNYSDVVPIPRISISNVQLADTVMFTIGALSEWLADPVMINSVLPGNPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLSPYIQQLEKLAEEIP
2	PROSPECT2	1ejlI	0.087	0.972	1.540	threading_2	GTVNWS----VEDIVKGISQLQATQAARKLLSREKIPKFVSFLGKTDCSPIQFESAWALTNIQTKAVVDPAFISLLASPHAHISEQAVWALGNIAGDAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDNERIEMVVKKGVVPQLVKLLGATELPIVTPEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSDQIQQVVNH-----GLVPFLVGVLSKADFKTQKEAAWAITNYEQIVYLVTKIIQVILDAISNIFQAAEKLGETEKL
3	PPA-I	3g61A1	0.091	0.937	1.209	threading_3	VALP-----LMMLIFGDMTDSFASVGNVSKNSTNMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHK---IRQKFFHAIMGWFDVHDVGELNTRLTDDVSKINE-GIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFS------GWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENVSLTREQKFETMYAQSLQI----PYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT-
4	SPARKS	3nbya	0.096	0.849	1.040	threading_4	TSSDPTCVEKEKVYIGKLNMILVQILKQEWPKHWPISDIVGASRTSESLCQNNMVILKLLSEEVF--------DFSSGQITQVKAKHL---KDSMCNEFSQI-----FQLCQFVMENSQNAPLVHATLETLLR----FLNWIPLGYIFETKLISTLIYLNVPMFRNVSLKCLTEIA-------------------GVSVSQYEEQFETLFTLTMMQLKIRLAYSNGKDDEQNFIQNLSLFLCTFLKQLLEKRLNLREALMEALHYMLLVSEVEETE---------IFKICLEYWNHLAAELYRESPFSTSASPLLSGS
5	PROSPECT2	1xm9A	0.077	0.943	1.531	threading_5	TCFQDESAGGICKLVDLLVQQAAAGALRNLVFRSGIREAVSLLRRTGNAEIQKQLTGLLWNLALPVLADRVIIPFSGWCVVDPEVFFNATGCLRMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEEETNPKGSGWLYHSDAIRTYLNLMGK------------------SKKDATLEACAGALQNLTMSSGMSQLIGLKEKGLPQIARLRSGASLLSNMSRHPLLHRVMPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMNNIINLCRSSASPKAAEASSKELQGVL
6	PPA-I	3zuxA	0.121	0.858	1.174	threading_6	PDTFKWAGPYIPWLLGIIMFGMGLTL--------KPSDFDILFKHPKVVIIGVIAQFAIMPATAWCLSKLLN-------LPAEIAVGVILVGCCPGGTASNVMTYLAR------------GNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAA--GMLMSIVKMVLLPIVLGLIVHKV--------LGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKIMESGLLFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHFAVPGALFSVWHNISGSLLATYWAAKA--------
7	SPARKS	1ee4a	0.082	0.918	1.036	threading_7	IASGTS--AQTKVVVD----ADAVPLFIQLLYTGSKEQAIWALGNVSTDYRDYVLQCNAMEPILG---------LFNSNKPSLIRTATWTLSNLCRGKKPQWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRPKRLVELLSHESTLVQTPALRAVGNIV---------TGNDLQT--QVVINAGVLPALRLLLSSENIKKEACWTISNITAGNTEQIQAVIDALIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVCIKPLCDLLNRIIEVTLDALENILKMGEADKEARGL
8	PROSPECT2	3a6pA1	0.092	0.953	1.510	threading_8	FKEKCPICVPCGLRLAHFGLQILEHVVKFRWNGMSRLEVMELIANGEENHIKDALSRIVV---------EMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFL--LNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLAGYIDWVSMSH----ITAENCKLLEILCLLLNEQQLGAAECLLIAVSRKGKLEDRKPLMAMHYILSAAQTADGGCALGNQLCALLGADSDVETPSNFGKYLESFLRSSTQMTWGALFYLRASMTNLVKMGFPSKTDS
9	PPA-I	3g61A4	0.095	0.890	1.162	threading_9	------GWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKLAAIRTVIAKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVIWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQ----RQNSNLFSLLFLILGIISFITFF------------------LQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPTGALTTRLANDAAQVKGATGSRLAVIFQN-------IANLGTGIIISLIYFENVLLVFSAIVFGAMAVGQVSSFAPDYAKA
10	PROSPECT2	2bkuB2	0.109	0.862	1.500	threading_10	MSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVAQMISNPNARPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAG--------------LHDKPEALFPYVGTIFQFIAQVAEDPQLYSE-----DATSRAAVGLIGDIAAMFPDGSIWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQL-------------------------SL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.420 to 2jr8A SCOP code=j.4.1.3	TM-score=0.605 to 1qgkA SCOP code=a.118.1.1	TM-score=0.778 to 1ialA SCOP code=a.118.1.1	TM-score=0.470 to 1j30A SCOP code=a.25.1.1	TM-score=0.416 to 1j30A SCOP code=a.25.1.1