Template-based Modeling Results for YBHL_ECOLI

Submitted Primary Sequence

>Length 234
MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR
CCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR
554233232201021000100020000000000000000000010110010012020100000000000000000113312100000000000000000000001001110000000000000000000010012101000100000000000000000001010010000000000000000000210120023132322210210000000100000000000002012334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAANSAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSSIFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFWLKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLDFINLFLMLLRIFGNRR
1	SPARKS	2xwub	0.087	0.983	1.160	threading_1	PSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLY-DKLGRLLTSYSWQHTEALLYGFQSIA---ETIDVNYSDVVPGLIGLINVQLADTVMFTIGALHPVMINSVLPLVLHALPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISH
2	PROSPECT2	1r2fA	0.094	1.000	1.429	threading_2	ISAINWNKIQDDKDLEVWNRLTSNFWLPEKVPLSNDIPAWQTLSAAEQQLTIRVFTGLTLLDTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKEVDAAYAWSEENPPLQRKAQIILAHYVSDEPLKKKIASVFLFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLYDNEIRYTENANKALMNLGYEA
3	SPARKS	3m1ic	0.107	0.919	1.079	threading_3	IISMCQDDEVFKTQKNLINKSDLTLVQILKQE-------WPQNWPEFIPELIGSSSVCENNMIVLKLLSEEVFDFSAEQMTQAKALHLKNSMSKEFEQIFKLCFQVLSSSSLIVATLESLLRYL-----------HWIPYRYIYETNILELLSTKFMTSPTRAITLKCLTEVSNLDLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGN-DQSFLQDLAMFLTTYLARN
4	PROSPECT2	3kb9A	0.094	1.000	1.357	threading_4	AVAFPRQLKRLMPADKVEEYADGLCYTDLMAQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFHNRPGVEEYLELRRLTFAHWIWTDLLEPSSVRKHPAYRRAALLSQEFAAWYNDLCSLLTLEEAIGEVRRRVEECITEFLAVERDALRFADELADGTVRGKELSGAVRANVGNMRNWFVYWFHHVDSWDDRS
5	SPARKS	2x1gf	0.094	1.000	1.064	threading_5	AQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLAEAYSNMNRAVKCVGTWIKNIGCVTITAVLLEVVHKCYWPCIHGCMTADENELAESCLKTMVNIIIQPDCHNYPAFVLIKMFLDSLSEITKTEWKRENDNEDIIVHIYMLFVSSVERHSTLLLSGELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSEQPDEKS
6	PROSPECT2	3a0oA3	0.085	1.000	1.351	threading_6	ERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLDASRKWLLARAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSPPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRFPTLGDLPGLKLGYNVRQFAGVTHYQWYFDHIKADATGTE
7	SPARKS	2bkub	0.096	0.974	1.011	threading_7	VE--YATDTVAETSASISTFVMDKLGQTMTLEDAQSLQELQSNILTVLAAVIRKSPSSVE--PVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLESPYLLKALNVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNI-GADFIPY-LNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKP
8	PROSPECT2	1t33A	0.100	0.897	1.349	threading_8	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLHATTRDIAALAGQNIAAIYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLA-------CKNMIMLLTQEDTVNLSKF-------ISREQLSPTSAYQLVHEQVIDPLHTHLTRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAEL-----IYQTVTCHIDLILHGLT-----Q
9	PROSPECT2	1h0oa	0.073	0.991	1.347	threading_9	RENPRRFVVFPIEYHDIWQMYKKAEAWTAEEVDLSKDIQHWEALKPDERHFISH--VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENMYSLLIDTYIKDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLKLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFLTVADRLMLELGFNK
10	MUSTER	3m1iC1	0.105	0.936	0.829	threading_10	MEGILDFSNDLDI-ALLDQVVSTFYQ---GVQQKQAQEILTKFQDQKADQILQFST-NPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQDDEVFKTQKNLINKSDLTLVQILKQEWP----PEFIPELIGSSSSSVNVCENNMIVLKLLSEEVFDFSMTQAKALHLKNSMSKEFEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIP-YRYIYET-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.736 to 1pw4A SCOP code=f.38.1.1	TM-score=0.625 to 1u6gC SCOP code=a.118.1.2	TM-score=0.854 to 1uzrB SCOP code=a.25.1.2	TM-score=0.685 to 1pw4A SCOP code=f.38.1.1	TM-score=0.613 to 1wa5B SCOP code=a.118.1.1