Template-based Modeling Results for YBHI_ECOLI

Submitted Primary Sequence

>Length 477
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
452310130000000000000010221023200100000000000000310220000000000000011122311130210021000100000000000000020000020001100120132110000000000000010010110100000000010002101232342223001000000000010000000000000000020013104130110000100010000010000000021132324423332102201342232323110000000000000012322112100000000000001101213101413112100000000000011013130020002002210223110000000000000001110000000000000000000210201110000000000000000011101000000000203021001000000000000000000000100101312
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALALLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
1	MUSTER	2x1gF	0.106	0.973	1.136	threading_1	YTIEGCVTITAVLLEVVHKCYWPCIHGMTADENELAESCLKTMVNIIIQPYPKTAFVLIKMFLDSLSEITKWKRENDNEDIIVHIYMLFVSSVERSTLLLSGITSADLVHRIVQEILHCTDKPTMALAFWYMLQDEVFAH---KCWEYIKPLYAHLTRILVRKSEQPDEKSLRCYRQDISDTFMYCYDVLNDYILEILAAMLDEAIADLQRHPTH-----WTKLEACIYSFQSRQIPRLMRVLAEIPYEKLN-VKLLGTALETMG--SYCNWLMYIPPAINLLVRGLNSSM-SAQATLGLKELCRDCLKPYAACHASLNTGRM-DSVRLMFSIGKLMSLLRPEEIPKYLDIIVSPCFEELQAARIRTIFRLNMISTLFSSLNTVLLVMQRTMPIFKRIAEMWVEEDVLEAACSAMKHAITNLRSQPMLQDLCLFIVASFQCCAPTLEISKTAIVMKPLMQQLLREFIQHSFKLFEST
2	SPARKS	2xwub	0.077	0.948	1.120	threading_2	SGSKIVLTRLCVALASLALSMMPDPC------------AVADMVRLFQAPVDGQGRCLALLELLTVLPEEFQTSRLPVRTSLAVEC-GAVFPLLEQLLQQPSSPSC-VRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSE-------LFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGEN--HSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSIYRVDISDTLMYVYEMLGYDKLGRLLTSYSWQHTEALLYGFQSIAETINYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSVSSVSTLKKICRECKYDLPPYAANVSQDVLMKQIHK--TSQCMWLMQALGFLLSALQVEEILKNLHSLISPY
3	PROSPECT2	1jdha	0.057	0.914	2.212	threading_3	EDQVVVNKAAVMVHQLS---------KKEASRHAIMPQMVSAIVRTMQNTNDVETARCTAGTLHNLLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLKMVALLNKTNVKFL--AITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY---------EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQN----------CLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNL-------TCNNYKNKMMVCQVGGIEAL----VRTVLRAGDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLNHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYENIQRVAAGVLCELAQDKEAAEAIELFRMS
4	MUSTER	1wa5C	0.089	0.992	1.095	threading_4	LEIKLVLDVFTAPFLNLLKTVDEQITANENILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYSNPLLEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLL-KYDILVSKSLSFLTAVTRI-IFNNESAMNNITEQIILPNVTLREEDVEGTRRRACTDFLKELKEKNEVLVTNIFLALYIYLFTALAINGNITNALNVVDFFTKEIAPDLTSIILRVDAIKYIYRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAE-NEFLMRSIFRVLQTSEDSIQPLFLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYT-QNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQSTIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLVPVLGIFQRL
5	SPARKS	3m1ic	0.095	0.929	1.003	threading_5	LQFSTNPQSKFIALSILDKLITRKWKLLPNDHRIGIRNFVVGMIISMCQKTQKNLINKSDLTLVQILKQEWPQNWPEIPELIGSSSSSVNVCENNMIVLKLLSEEEQMTQAKALHLKNSMSKE------FEQIFKLCFQVLEQGSSSSLIVATLESLLRYLHWIPYRYIYETNILELLS------------TKFMTSPDTRAITLKCLTEVSNLKIPQDN---------DLIKRQTVLFFQNTLQQIATSVMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVADLFYLKKHIYEEICSQLRLVIIENMVFVKESDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMSEDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQ-------YPRFL
6	PROSPECT2	1qgra	0.065	1.000	2.166	threading_6	MEVENLPTFLVELSKNYVLHTLGTETYRPSSASQCVAGIALEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATQCPDTRVRVAALQNLVKIMSLYYQYMLFAITIEAMKSDIDEVALQGIEFWSNVCDESKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLLLETTDRPDGHQNNLRSSAYESLMEIVKNSAVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLAQVDKSDYDMVDYLNELRESCLEAYTGIVQGILSFIDHIAGD
7	MUSTER	1b3uA	0.107	0.958	1.078	threading_7	LGVERTRSELLPFLTDTI----------EDEVLLALAEQLGTFTTLVGG--PEYVHCLLPPLESLATVEETVDKAVESLRAISHEHSPDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVS--SAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEPMFSNLA-DSVRLLAVEACVNIAQLLDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAKDCEAEVRAAASHKVKEFCELSCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELA-EDAKWRVRLAIIEYMPLLAGQL---VEFFDEKLNSLCMAW-LVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRM
8	PROSPECT2	1b3ua	0.066	0.958	2.063	threading_8	IALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLGDWFTSRTSACGLFSVCYPRVSVKAELRQYFRNLCSDDTPMVRR--AAASKLGEFAKVLELDNVKSEIIPMFSNLA-------SDEQDSVRLLAVEACVNIAQLLPQEDL-----EALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDA----NQHVKSALASVIMGLSPILGKDNTIEHLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLV--DHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKALTVLSLA
9	MUSTER	3ea5B	0.075	0.979	1.039	threading_9	LQSYNFALSSIKDVVPNLLNLLTRQNNVSMSAGACLQLFAQNCLEPVLEFVDNWRNREAAVMAFGSIMDGPDKVQRTLPSILNLMNDSLQVKETTAWCIGRIADSVAHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATVAETSASISTFVMDKLGQTMSVDENQLT-LEDAQSLQELQSNILTVLAAVIRKS--PSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEVSITAVGFIADISNSLEEDFRAQMISNPNARRPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQNTKPALDYQIKVLEAVLDAYVGIVAGLPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLI------GDIAAMFPDGSIKVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL-
10	PROSPECT2	1w63A	0.067	0.964	2.036	threading_10	MTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE-----------LMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLHDVSGISDPFLQVRILRLLRILGMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVKDLDVSIKRRAMELSFLLYFLDSCEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCE------EEEPIQVTEDEVLDILESVLISVTRGYALTAIMKLSTYNALF

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.615 to 1m8xA SCOP code=a.118.1.8	TM-score=0.514 to 2q6hA SCOP code=f.54.1.1	TM-score=0.577 to 1m8xA SCOP code=a.118.1.8	TM-score=0.697 to 1wa5B SCOP code=a.118.1.1	TM-score=0.687 to 1wa5C SCOP code=a.118.1.1