Template-based Modeling Results for YBHH_ECOLI

Submitted Primary Sequence

>Length 350
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
CCCCCEEEECCCCCCEEEEEHHHCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEECCCCEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCEEEEEHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECCCEEEEEEEEEECCCCEEEEEEEEEEEEEHEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
55311010012110200000031013232200300010021123120111111212101000003123340100000000103322010211000000000000022100203321010001012111001010202312022301020110201002000102201124114101232101102401000000200000000320222123012103213200210110011002101003113200010000020342110000000121003000000000000001031100120033223120102010010101021225312012000010001002010214
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
1	MUSTER	3g7kB	0.379	0.994	3.597	threading_1	QMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLGDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPEDYVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRTGDEDTVRIGHPAGVIPVVSIVK--DGKVEKAALIRTARRIMEGYVYVE
2	SPARKS	3g7ka	0.376	0.994	10.338	threading_2	QMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLSDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPEDYVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRDGDEDTVRIGHPAGVIPVVSIVKDG--KVEKAALIRTARRIMEGYVYVE
3	PROSPECT2	3g7kA	0.379	0.994	6.491	threading_3	SDRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLSDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPEDDVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLDTGDEDTVRIGHPAGVIPVVSIVK--DGKVEKAALIRTARRIMEGYVYVE
4	PPA-I	3g7kB	0.379	0.994	9.143	threading_4	QMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLSDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPEDDVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRTGDEDTVRIGHPAGVIPVVSIVK--DGKVEKAALIRTARRIMEGYVYVE
5	HHPRED-l	2pw0_A	0.368	0.986	9.941	threading_5	QIKVAATYMRGGTSKGVFFRLQDLPEAAPARDALLLRVIGSPDPKQIDGMGGATSSTSKTVILSHSSKANHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAISNGLIDPRNGVCTVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQIEFMNPAAD----MFPTGNLVDVLGRFNATMINAGIPTIFINAEDLGYTGTELQDDINSDNAALAKFETIRAHGALRMGLIKHIRQHTPKIAFVAPPKSYADLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHPSGTLRVGAQAVNGEWTVIKAIMSRSARVLMEGFVRV-
6	HHPRED-g	2pw0_A	0.370	0.989	8.644	threading_6	QIKVAATYMRGGTSKGVFFRLQDLPEAAPARDALLLRVIGSPDPKQIDGMGGATSSTSKTVILSHSSKANHDVDYLFGQVSIDKPFVDWSGNCGNLTAAVGAFAISNGLIDPRNGVCTVRIWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQIEFMNPAAD----MFPTGNLVDVLGRFNATMINAGIPTIFINAEDLGYTGTELQDDINSDNAALAKFETIRAHGALRMGLIKHIRQHTPKIAFVAPPKSYADLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEKEAVRFGHPSGTLRVGAQAVNGEWTVIKAIMSRSARVLMEGFVRVP
7	SP3	3g7ka	0.379	0.994	9.582	threading_7	QMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLSDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPEDYVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRDTDEDTVRIGHPAGVIPVVSIVK--DGKVEKAALIRTARRIMEGYVYVE
8	SAM-T99	3g7kB	0.379	0.994	7.609	threading_8	QMRIPCVIMRAGTSKGIFLKGNDLPADQELRDKVILRIFGSPDVRQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKAVEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGAATGKVLPTGNVVDVLGDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEAFPMIAFVTKPGDDVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLDTGDEDTVRIGHPAGVIPVVSIVK--DGKVEKAALIRTARRIMEGYVYVE
9	MUSTER	2h9fA	0.337	0.983	3.225	threading_9	QIRIPATYLRGGTSKGVFFRLEDLPESCREARDRLFRVIGSPDPAHIDG-GGATSSTSKCVILSKSSQPGHDVDYLYGQVSIDKPFVDWSGNCGNLSTGAGAFALHAGLVDPEDGICEVRIWQANIGKTIIAHVPVSGGQVQETGDFELDGVTFPAAEIVLEFLDPSD--GGAIFPTGNLVDDLEGTFKATINAGIPTVFVNAEEIGYRGTELREEINGDPQQLARFERIRVAGALRGLIKTPTRQHTPKIAFVAPPRDYIDLLVRALSGKLHH---AGTAAVAIGTAAAIPGTLVNLAAGGGERSAVRFGHPSGTLRVGAEASQANGEWTVTKAISRSARILEGWVRVP
10	SPARKS	2h9fa	0.344	0.980	8.989	threading_10	QIRIPATYLRGGTSKGVFFRLEDLPESCREARDRLFRVIGSPDPYHIDG-GGATSSTSKCVILSKSSQPGHDVDYLYGQVSIDKPFVDWSGNCGNLSTGAGAFALHAGLVDPEDGICEVRIWQANIGKTIIAHVPVSGGQVQETGDFELDGVTFPAAEIVLEFLDPSD--GGAIFPTGNLVDDLEGTFKATINAGIPTVFVNAEEIGYRGTELREEINGDPQQLARFERIRVAGAL-RGLIKTTRQHTPKIAFVAPPRDYRDLLVRALSGKLHH---AGTAAVAIGTAAAIPGTLVNLAAGGGERSAVRFGHPSGTLRVGAEASQANGEWTVTKAISRSARILEGWVRVP

Predicted Tertiary Structure


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TM-score=0.798 to 2h9fA SCOP code=d.21.1.4	TM-score=0.800 to 2h9fA SCOP code=d.21.1.4	TM-score=0.732 to 2gkjA SCOP code=d.21.1.1	TM-score=0.734 to 2gkjA SCOP code=d.21.1.1	TM-score=0.801 to 2h9fA SCOP code=d.21.1.4