Template-based Modeling Results for YBHG_ECOLI


  Submitted Primary Sequence

>Length 332
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEECCCCCEEEEEECCCEEEEEECCHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
53321101000000000000000111213332211010102020010004120102101032222022111002013321120022021101202221231232123310220121023021102202311210211152521113102202211220221021023112212222233112202110220211012012213202010212010001002301101420100000114201010103131033033122020101022322020100000220311242132322211000202010232332032000010201333369
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
1MUSTER3fppB0.2330.7742.199threading_1---------------------------RPGDLQVLATGKLDALRKVDV-QVSGQLKTLSVAIGDKVKKDQLLGVID-----------------PEQAENQIKEV--EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT-------------------RIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
2SPARKS3fppa0.2660.7804.981threading_2--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME-------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR-------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
3PROSPECT23fppA0.2660.7803.908threading_3P--------------------------GDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM-------------------ELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTID-------------------AQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIF---------YYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
4PPA-I3fppB0.2340.7863.213threading_4------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID-------------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT-------------------RIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
5HHPRED-l3fpp_A0.2710.7774.585threading_5--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQR-------------------QQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDA---------IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVK-
6HHPRED-g3fpp_A0.2710.7774.444threading_6---------------------------PGDQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELR-------------------AQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE----KVND-----AIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
7SP33fppa0.2590.7804.060threading_7--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME-------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR-------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTP-----EKVNDAI----FYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
8SAM-T993fppB0.2690.7624.839threading_8-------------------------RPGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAE-------------------AELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE---------KVNDAIFYYARFEVPNPNGLLRLDMTAQVHI-------
9MUSTER3lnnA0.2520.7891.603threading_9V-ESPLRRTLAVAPAT----------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGH-----------------ILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQI--LDADTRT---------TKVRMVFDNPDGRLRPGMFAQATFLSQPHEG
10SPARKS3lnna0.2470.7803.601threading_10PLRRTLAVAPAT--------------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG-----------------HILAVRSPINGRVVDLNAATGAYWNDTTSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD-PQPGKVRYVGQI--LDADTRT---------TKVRMVFDNPDGRLRPGMFAQATFLSQPHEG

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.467 to 1qjoA
SCOP code=b.84.1.1
TM-score=0.494 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.498 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.501 to 1iyuA
SCOP code=b.84.1.1
TM-score=0.498 to 1l8dA
SCOP code=h.4.12.1