Template-based Modeling Results for YBGJ_ECOLI

Submitted Primary Sequence

>Length 218
MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
CCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
55312001102100001023312210121012002202413200100000110000022132112200210131133232233322102000011120010011003213022320020012120000000001110000101330202342322220110000001200000002011100000001021012233310102101102012234233
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVVEAIPGMNNITVILRNPESLALDAIERLQRWWEESEALEPESRFIEIPVVYGGAGGPDLAVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPAGSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
1	MUSTER	2phcB	0.385	0.977	3.757	threading_1	----IIKPAGDSAFLISFGDEISEEINDRVHSLAKAIEKPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKRISAREVER-IKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKEF
2	SPARKS	3opfa	0.360	0.917	5.953	threading_2	---------MVRGFYLRFGEGVSEEANRRALALAEALLRPPGLLDAVPAYGVLYLEYDPRRLSRGRLLRLLKG------LPQERARVVEIPVRYD---GEDLPEVASRLGLSLEAVKALHQKPLYRVYALGFTPGFPFLAEVEPALRLPRKPHPRPRVPAHAVAVAGVQTGIYPLPSPGGWNLLGTSLVAVYDPHRETPFLLRPGDRVRFLEAEGPTP
3	PROSPECT2	2phcB	0.390	0.977	4.585	threading_3	I----IKPAGDSAFLISFGDEISEEINDRVHSLAKAIESPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKR-ISAREVERIKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKFW
4	PPA-I	2phcB	0.390	0.977	5.621	threading_4	----IIKPAGDSAFLISFGDEISEEINDRVHSLAKAIEKPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKRISA-REVERIKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKEF
5	HHPRED-l	2phc_B	0.387	0.972	7.516	threading_5	----IIKPAGDSAFLISFGDEISEEINDRVHSLAKAIEKPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKRISARE-VERIKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKE-
6	HHPRED-g	2phc_B	0.385	0.977	6.459	threading_6	----IIKPAGDSAFLISFGDEISEEINDRVHSLAKAIEKPEWLVELVPAYSSLLVIYDPLKASYEEVESYLKRISARE-VERIKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKEF
7	SP3	3mmlb	0.361	0.927	4.944	threading_7	STLGTVHNYGDQALLLEFDS------TAEVLAWTETLRELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRITHQPPGDRVDVTIDVVYD---GADLHEVASLTGT-PAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTD-AVFDVNRDKPALLTPG-WVQFRAVG----
8	SAM-T99	2phcB	0.394	0.977	6.056	threading_8	----IIKPAGDSAFLISFGDEISEEINDRVHSLAKAIEKSPWLVELVPAYSSLLVIYDPLKASYEEVESYLKRISAR-EVERIKGKTIEIPVAYGGEFGPDIEFVAQYNGLSVDDVIEIHSKPLYRVYFLGFLPGFAYLGGMDERIATPRLEKPRLKVPAGSVGIAGKQTGWYAIESPGGWRIIGRIPLRTFNPGKVPPSIVLPGDYVKFVPIDEKEF
9	MUSTER	3mmlB	0.378	0.922	3.238	threading_9	STLGTVHNYGDQALLLEFDS------TAEVLAWTETLRELLGVVDIVPAARTVLVKLAGPRY-QAPTRQRLGKLRVRPEAITHQRVDVTIDVVYD---GADLHEVASLTG-TPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTD-AVFDVNRDKPALLTPG-WVQFRAVG----
10	SPARKS	3mmlb	0.378	0.922	5.393	threading_10	STLGTVHNYGDQALLLEFDS------TAEVLAWTETLRELLGVVDIVPAARTVLVKLAGPRY-QAPTRQRLGKLRVRPEAITHQRVDVTIDVVYD---GADLHEVASLTG-TPAQVIAAHTGTPWRVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTD-AVFDVNRDKPALLTPG-WVQFRAVG----

Predicted Tertiary Structure


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TM-score=0.954 to 2phcB SCOP code=b.62.1.4	TM-score=0.956 to 2phcB SCOP code=b.62.1.4	TM-score=0.728 to 2phcB SCOP code=b.62.1.4	TM-score=0.976 to 2phcB SCOP code=b.62.1.4	TM-score=0.973 to 2phcB SCOP code=b.62.1.4