Template-based Modeling Results for YBFG_ECOLI

Submitted Primary Sequence

>Length 216
MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNGXLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPIADDVAGVIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNGXLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPIADDVAGVIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
CCCHHHHHCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEECCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCEEEHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNGXLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPIADDVAGVIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
544132113332100110120033032201002113310320013021223011000011010000120000000111241233002112433121221000000001000001112014310000000121131120301002000000111021004202133022003402112000000111132022323210102200201121133225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKDLAETALYQLQVTTKSPMGALVYGSGGLLIDNGXLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPIADDVAGVIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYENVRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ
1	PROSPECT2	1nf2A	0.116	0.958	1.106	threading_1	MYRVGTLLNDNLEISEKDRRNIEKLSRKCYVVFRMLVSTLNVEKKYFKRTFPYNGAIVYLPEEGVILNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNKMGTTKLLLIDTERFKDVVKVFKSFPTYLEIVPKNVDKGKAL--------RFLRERMNWKDNENDLFMFEEAG-LRVAMENAIEKVKEASDIVTLTNNDSGVSYVLERDCLD
2	PPA-I	2prvA	0.100	0.694	1.435	threading_2	------------GIYSKVENFINENKQNAIFTGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGLFG--VLVLGYNFDHASVVNRTNEYKEHYGLTDGLVVIEDVDYFAYCLDTNKKDGECP-VVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD---------------------------------------------------
3	HHPRED-g	2prv_A	0.123	0.676	1.180	threading_3	YSKVENFINENKQN-------------AIFTEGASHENIGRIEENLQCDLPNSYKWFLEKYGAGGL-FG-VLVLGYNFDH--ASVVNRTNKEHGLTDGLVVI-EDVDYFAYCLDTNK-KDGECPVVEWDRVIGYQDTVADSFIEFFYNKIQEAKDDWDEDEDWDD---------------------------------------------------
4	PROSPECT2	1pswA	0.084	0.991	1.072	threading_4	YRTLQARYPQAIIDVAPAWCRPLLSRPEVNEAIPEIGERRKLGHSLPNSFKSALVPLFAGIPHRTGWRGERDVRVLDKEAWPLVERYIALAYDKGIRTAQDLPQPLLWPQLQVSQFSLSSERPIGFCPGAEFGPAKRWPHHYAELAKQLIDEGDHEAGNEAGETQLDQAVILILSHKARVIRLITGEGYHQSLID--ITPQRVLEELNALLLQEEA
5	PPA-I	2icgA	0.130	0.676	1.340	threading_5	---------GASSFLEEVDRLITLSGITFHASTGTPELIKIYQDALGNEFPETYKLFLEKYGTLTFNG--VSFYGISKRGLSAASIPTEQARTFGDINKEIIKNSGYGSIFSIDTSIIGSEGEVIVETNLDNTEKKVVANSFGEFLLEEIELSLTDL-----------------------------------------------------------
6	PROSPECT2	1wr8A	0.079	0.940	1.069	threading_6	KIKAYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP-----VVAEDGGAISYKKK-RIFLASMDEEWILWNEIRKRFPNARTSYT---MPDRRAGLVIMRETINLNLNLVAVDSGFAIHVKKPWINKGSGIEKALGIKPKEVAHVGDGENDLDAFKVVG----YKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEK
7	PPA-I	3d5pA	0.058	0.560	1.087	threading_7	------------------------GEVIESKWGASSASIDDVEKLLNTTLPKQYKSFLLWSNGGEGKLGIYIWA------IEDVIAYNHDQKYLQKEYWAFGDG--DIGYILHLSD--NSIYRVDLGDLDITSIKYIAPSFDDFLGKAIYLNFNK-------------------------------------------------------------
8	PROSPECT2	1g55a	0.061	0.981	1.039	threading_8	NEVYKYNFPHAKTIEGITLEEFDRLSFDMILMSPPNSFLHILDILPRLQKLPKYLLIQTIENGFQYQRLRYFLIAKLQSEPLPFQAPGQVLMEFPKLSVKMLKDFLEDDVQPTRRSVCFTKGYGSYIEGTGSVLQTAEDVQVENIYKSLTNLSQEEQITKLLILKPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVH----VVAKLIKILYE
9	PROSPECT2	2ou4A	0.128	0.903	1.034	threading_9	MNKLGEFHNLSDAKKRELKAVADDLGLTVMCASPDKSVRDAGTEYVK---RLLDDCHLLGAPVFAG---LTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQW---------------LCNDAKEAIANIEETSFRDAILACKWDEIFGALKEIGYDGTIVMEPFMRKGGSVSRAVGVWRMDERARRSLQFVRDKLA
10	SPARKS	1wr8a	0.074	0.935	0.689	threading_10	IKAIGTITYPNRMIHEKALEAIRRASLGIPIMLNTVQFAEAASILIGTS-----GPVVAEDGGAISYKKRIFL----ASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINLNLNLVAVDSGFAIHVKKPWINKGSGIEKASEGKPKEVA--HVGDG-ENDLDAFKVVG-YKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHILEK-

Predicted Tertiary Structure


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TM-score=0.746 to 1nf2A SCOP code=c.108.1.10	TM-score=0.784 to 2prvA SCOP code=d.369.1.1	TM-score=0.611 to 1pswA SCOP code=c.87.1.7	TM-score=0.882 to 1wr8B SCOP code=c.108.1.10	TM-score=0.547 to 2prvA SCOP code=d.369.1.1