Template-based Modeling Results for YBET_ECOLI

Submitted Primary Sequence

>Length 184
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH
4422001000000000010011114323233000100101222311131011002100321112001100100220231222102201200120042312300010000012021033103200300220042111200100000122021032112201300210052313200210101124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKKLMYIFAIFIVAAITCISQPKKTTLRDKAMVNYAFDYLSSPGSLPFTTAATELSAIHGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGLPAH
1	MUSTER	3rjvA	0.154	0.989	2.451	threading_1	DRRAQYYLADTWVSSYQKAEYWAQKAAADGDALALLAQLKIRNPQDYPQARQLAEKAVEAGSKSGEIVLARVLVNRQ-AGATDVAHAITLLQDAARDSEAVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTYAEYWAGFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
2	SPARKS	2xm6a	0.235	0.995	4.575	threading_2	GEAKAQLELGYRYFDLTQAMDWFRRAAGYTPAEYVLGLRYMNGEGDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGN-GVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYF
3	PROSPECT2	1ouvA	0.153	0.995	2.611	threading_3	KENSGCFNLGVLYYQLKKAASFYAKDLNYSNGCHLLGNLYYSGQGNTNKALQYYSKACDLKYAEGCASLGGIYHDG-KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYN
4	PPA-I	3rjvA	0.148	0.989	3.591	threading_4	QYYLADTWVSSGDYQKAEYWAQKAAAQGDGDALALLAQLKIRNPQDYPQARQLAEKAVEAGSKSGEIVLARVLVNRQ-AGATDVAHAITLLQDAARDSEAVDAQLLGLIYASGVHGPEDDVKASEYFKGSSSLSRTYAEYWAGFQQGEKGFIEPNKQKALHWLNVSCLEGFDTGCEEFDRISK-
5	HHPRED-l	1klx_A	0.169	0.707	3.882	threading_5	-----------------------------------------GGGTVKKDLKKYYVKACELNEMFGCLSLVS-------NSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGIL------
6	HHPRED-g	1klx_A	0.177	0.707	3.090	threading_6	-----------------------------------------GGGTVKKDAIQYYVKACELNEMFGCLSLV------S-NSQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGIL------
7	SP3	2xm6a	0.235	0.995	4.793	threading_7	GEAKAQLELGYRYFQLTQAMDWFRRAAGYTPAEYVLGLRYMNGEGDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGN-GVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYF
8	SAM-T99	2xm6A	0.273	0.995	5.989	threading_8	VNLEQLKQKAESGEAKAQLELGYRYFQGLPQAQQNLGVMYHEGNGEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQANLGAIYFR-LGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQGLSAAQVQLGEIYYY
9	MUSTER	1klxA	0.177	0.707	2.227	threading_9	-----------------------------------------GGGTDLKKAIQYYVKACELNEMFGCLSLVSN-------SQINKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGIL------
10	SPARKS	3rjva	0.193	0.902	4.056	threading_10	--------------EPGSQY-QQQAEAGDRRAQYYLADTWVSS-GDYQKAEYWAQKAAAQGDGDALALLAQLKIRN--PQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDLGLIYASGVHGPEDDVKASEYFKGSSSLSRTYAEYWAGFQQGE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.611 to 2vyiA SCOP code=k.38.1.1	TM-score=0.598 to 2q7fA SCOP code=k.38.1.1	TM-score=0.769 to 1ouvA SCOP code=a.118.18.1	TM-score=0.826 to 1ouvA SCOP code=a.118.18.1	TM-score=0.584 to 1hz4A SCOP code=a.118.8.2