Template-based Modeling Results for CAAL_ECOLI

Submitted Primary Sequence

>Length 372
MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD
552331322331100011100001231232132021002103432222313221230101011310320320021012003101300341401000000011332342311323102200210110032010000000010211210010010002000000000100110222212010000100220132111210111210110020012121031221000101122301201010022011011000000001000110122322423322110021011100310030100112212211012002200320120045121220022013102322231210120133211021003200222245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPLPDFHVSEPFTLGIELEMQVVNPPGYDLSQDSSMLIDAVKNKITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMIDSIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD
1	MUSTER	1r8gB	0.920	0.935	2.603	threading_1	-PLPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSS-LIDAVKNKITAGEV--KHITESLELATDVCRDINQAAGQFSAQKVVLQAATDH-HLEICGGGTHPFQKWQQ----------RTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNG-PPWVSNWQQFEALFRCLSY-TTIDSIKDLHWDIRPSPHFGTVEVRV-DTPLT-LSHAVNAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLN-EAQLRDFVADGGSLIGLVKKHCEIWA--
2	SPARKS	1r8ga	0.965	0.919	6.409	threading_2	--LPDFHVSEPFTLGIELE-QVVNPPGYDLSQDS-SLIDAVKNKITAGEVKHDITES-LELATDVCRDINQAAGQFSA-QKVVLQAATDHHLEICGGGTHPFQKWN----------------FGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNG-PPWVSNWQQFEALFRCL-SYTTIDSIKDLHWDIRPSPHFGTVEVRVDT-PLTLSHAVN-AGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLN-EAQLRDFVADGGSLIGLVKKHCEIWA--
3	PROSPECT2	1r8gA	0.865	0.919	3.562	threading_3	L--PDFHVSEPFTLGIELEQ-VVNPPGYDLSQDSSLIDA--VKNKITAGEVKHDITESLELATDVCRDINQAAGQFSA-QKVVLQAATDHHLEICGGGTHPFQKWN----------------FGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNGPP-WVSNWQQFEALFRCL-SYTTIDSIKDLHWDIRPSPHFGTVEVRVDTPLT--LSHAVNAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSG-LNEAQLRDFVADGGSLIGLVKKHCEIW--A
4	PPA-I	1r8gB	0.868	0.935	3.649	threading_4	-PLPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSSLID---AVKNKITAGEVKHITESLELATDVCRDINQAAGQFSAQKVVLQAATDH-HLEICGGGTHPFQKWQQ----------RTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNGPP-WVSNWQQFEALFRCLSY-TTIDSIKDLHWDIRPSPHFGTVEVRVDTPLT--LSHAVNAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLN-EAQLRDFVADGGSLIGLVKKHCEIWA--
5	HHPRED-l	1r8g_A	1.000	0.919	7.964	threading_5	--LPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSS-LIDAVKNKITAGEVKHDITES-LELATDVCRDINQAAGQFSA-QKVVLQAATDHHLEICGGGTHPFQKW----------------NFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNGP-PWVSNWQQFEALFRCLSYTT-IDSIKDLHWDIRPSPHFGTVEVRV-DTPLTLSHAVN-AGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQL-RDFVADGGSLIGLVKKHCEIWA--
6	HHPRED-g	1r8g_A	1.000	0.919	6.556	threading_6	--LPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSS-LIDAVKNKITAGEVKHDITES-LELATDVCRDINQAAGQFSA-QKVVLQAATDHHLEICGGGTHPFQKW----------------NFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNGP-PWVSNWQQFEALFRCLSYTT-IDSIKDLHWDIRPSPHFGTVEVRV-DTPLTLSHAVN-AGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQL-RDFVADGGSLIGLVKKHCEIWA--
7	SP3	1r8ga	0.947	0.919	6.480	threading_7	--LPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSSLIDA-VKNKITAGEVKHDITE-SLELATDVCRDINQAAGQFSA-QKVVLQAATDHHLEICGGGTHPFQKW---------NF-------GYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNG-PPWVSNWQQFEALFRCL-SYTTIDSIKDLHWDIRPSPHFGTVEVRVDT-PLTLSHAV-NAGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLN-EAQLRDFVADGGSLIGLVKKHCEIWA--
8	SAM-T99	1r8gB	0.920	0.935	8.538	threading_8	-PLPDFHVSEPFTLGIELE-QVVNPPGYDLSQDSSLIDAVKN-KITAGEVKH--ITESLELATDVCRDINQAAGQFSAQKVVLQAATDH-HLEICGGGTHPFQKWQ----------QRTLENFGYLIQQATVFGQHVHVGCASGDDAIYLLHGLSRFVPHFIALSAASPY-QGTDTRFASSRPNIFSAFPDNG-PPWVSNWQQFEALF-RCLSYTTIDSIKDLHWDIRPSPHFGTVEVRV-DTPLTLSHAVN-AGLIQATAHWLLTERPFKHQEKDYLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEALHRQVVSGLNEAQ-LRDFVADGGSLIGLVKKHCEIWA--
9	MUSTER	2gwcF	0.149	0.938	1.576	threading_9	LTREDLKSKEKWRIGTEHEKFGFEVNTLRPYDQIAELLNSIAERFGKQSISLEPG-GQFELSGAPLETLHQTCAEVNSHLYQVKAVAEE-GIGFLG-GFQPKWRREDIP-TPKGRYDIRYPKVGSLGLDLRTCTVQVNLDFSSEAD-IRKFRAGLALQPIATALFANSPFTEGKPNGFLS-RSHIWTDTDRTGLPFVFDDSFGFEQYVDYALDVPYFNHLTTIFPEVRLKR-----YERGADGGP-WRRLCALPAFWVGLLYEDVLQSVLDLTADWTPAERELRNKVPVTGLKTPFRD------GLLKHVAEDVLKLAKDGLERRGEVGFLNAVTEVVRTGVTPAENLLEYNGEGQSVDPVFQELLY-----
10	SPARKS	2gwca	0.151	0.941	3.933	threading_10	LTREDLKSKEKWRIGTEHEKFGFEVNTLRPKDQIAELLNSIAERFEWEKVEGDKIGGQFELSGAPLETLHQTCAEVNSHLYQVKAVAEE-GIGFLG-GFQPKWRREDIP-TPKGRYDIRYPKVGSLGLDLRTCTVQVNLDFSSEAD-IRKFRAGLALQPIATALFANSPFTEGKPNGFLS-RSHIWTDTDRTGLPFVFDDSFGFEQYVDYALDVPYFNHLTTIFPEVRLKRYE-----RGADGGP-WRRLCALPAFWVGLLYEDVLQSVLDLTADWTPAERELRNKVPVTGLKTPF------RDGLLKHVAEDVLKLAKDGLERRGEVGFLNAVTEVVRTGVTPAENLLEYNGEGQSVDPVFQELLY-----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.962 to 1r8gB TM-score=0.994 to native SCOP code=d.128.1.3	TM-score=0.962 to 1r8gB TM-score=0.994 to native SCOP code=d.128.1.3	TM-score=0.950 to 1r8gB TM-score=0.981 to native SCOP code=d.128.1.3	TM-score=0.951 to 1r8gB TM-score=0.982 to native SCOP code=d.128.1.3	TM-score=0.963 to 1r8gB TM-score=0.995 to native SCOP code=d.128.1.3

Experimental Structure

Download 1r8gB

SCOP code=d.128.1.3