Template-based Modeling Results for YBCL_ECOLI


  Submitted Primary Sequence

>Length 183
MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
312100000000000013212020103304223301221122121031131101011220242020000001112112101000000000111122122322443223122101203111121101000014133110000100004233130323011210020022110010101011225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKTLIVSTVLAFITFSAQAAAFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYMLNANKIATAEITPVYEIK
1MUSTER1fuxA0.9940.8853.741threading_1--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGY-LNANKIATAEITPVYEIK
2SPARKS1fjja0.5190.8425.375threading_2---------------------AKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGS--GLVAPDGVLQTRTDFGKTGYDGAAPPKGE-THRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFS---
3PROSPECT21fuxA0.9570.8853.102threading_3--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSS-GALVGYLNANKIATAEITPVYEIK
4PPA-I1fuxA0.9570.8854.465threading_4--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSS-GALVGYLNANKIATAEITPVYEIK
5HHPRED-l1fux_A0.9940.8807.050threading_5--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGY-LNANKIATAEITPVYEI-
6HHPRED-g1fux_A0.9940.8856.249threading_6--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGY-LNANKIATAEITPVYEIK
7SP31fjja0.5130.8425.253threading_7---------------------AKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGL--VAPDGVLQTRTDFGKTGYDGAAPPKGE-THRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFS---
8SAM-T991fuxA0.9750.8855.916threading_8--------------------EFQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVDSNSSGALVGYLNA-NKIATAEITPVYEIK
9MUSTER1vi3A0.5130.8523.564threading_9--------------------SLKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGL--VAPDGVLQTRTDFGKTGYDGAAPPKGE-THRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFSE--
10SPARKS3n08a0.3470.8035.148threading_10-------------------NAMQLTSQAFSYGRPIPKKY-----SCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPDGLWIHWIVYNLSPVVSNLAEGA--------QIFAVQGLNTAGEIGYCPPCPP--DAKHRYYFYAYALDVV-LSDEEGVTKEQLLEAMDGHIIATAELMGTYEK-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.935 to 1fuxA
TM-score=0.992 to native
SCOP code=b.17.1.2
TM-score=0.934 to 1fuxA
TM-score=0.991 to native
SCOP code=b.17.1.2
TM-score=0.909 to 1vi3A
TM-score=0.942 to native
SCOP code=b.17.1.2
TM-score=0.934 to 1fuxA
TM-score=0.991 to native
SCOP code=b.17.1.2
TM-score=0.934 to 1fuxA
TM-score=0.991 to native
SCOP code=b.17.1.2

  Experimental Structure

Download 1fuxB
SCOP code=b.17.1.2