Template-based Modeling Results for YBBN_ECOLI


  Submitted Primary Sequence

>Length 284
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
CCCCCCEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHCCCCCCCEEEEEECCEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
54323112012210230033123100000000310310120020022003213210000101022232003301131000000012121132132222230022002400333322102201311332222201300230143133213000100100121321310120032022333223020000102002202513313201220342331020001001111321213200310000023122222230120002002002221210120032013113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAMQLMQESNYTDALPLLKDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYRRQLYALLY
1MUSTER3qdnA0.9360.9863.443threading_1ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQ-IAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAQ--LQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
2SPARKS3qdna0.9320.9865.149threading_2ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAE-QIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQA--QLQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
3PROSPECT23qdnA0.9140.9864.202threading_3ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQ-IAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEE--LKAQQAQLQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
4PPA-I3qdnA0.9360.9864.047threading_4ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQ-IAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAQ--LQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
5HHPRED-l3qou_A1.0000.9612.420threading_5--VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLD-VLPREEEL-AQQAMQLMQESNYTDALPLL-DAWQLSNQNGEIGLLLAETLIALNRSEDAEAVL-TIPLQDQDTRYQGLVAQIELL-QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLR-DLTAADGQTR-TFQEILAALGTGDALAS-YRRQLYALL-
6HHPRED-g3qou_A1.0000.9652.162threading_6--VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLD-VLPREEEL-AQQAMQLMQESNYTDALPLL-DAWQLSNQNGEIGLLLAETLIALNRSEDAEAVL-TIPLQDQDTRYQGLVAQIELL-QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLR-DLTAADGQTR-TFQEILAALGTGDALAS-YRRQLYALLY
7SP33qdna0.9320.9865.028threading_7ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAE-QIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQA--QLQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
8SAM-T993qdnA0.9360.9864.581threading_8ASVQNIVNINESNLQQTLEQS-TTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDAEQ-IAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREEELKAQQAQ--LQEGNYIDALPLLKDAWQLSSQNSEIGLLLAEAQIALNRSEEAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVADNPQDAALATQLALQLHQVGRNEEALELLFSHLRKDLTAAEGQTRKTFQEILAALGTGDALASKYRRQLYALLY
9MUSTER2r5sA0.4350.5991.636threading_9-----------------------------------------------------------------------------------------------------------------DEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDG-EVKKTFDILSALGQGNAIASKYRRQLYSILY
10SPARKS3qoua0.9600.9654.672threading_10--VENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDVLPREEEL--AQQAMQLMQESNYTDALPLL-DAWQLSNQNGEIGLLLAETLIALNRSEDAEAVL-TIPLQDQDTRYQGLVAQIELLQAA-DTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLR-DLTAADGQ-TRTFQEILAALGTGDALA-SYRRQLYALLY

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.624 to 1nswA
TM-score=0.907 to native
SCOP code=c.47.1.1		 TM-score=0.626 to 1nswA
TM-score=0.911 to native
SCOP code=c.47.1.1		 TM-score=0.622 to 1nswA
TM-score=0.731 to native
SCOP code=c.47.1.1		 TM-score=0.626 to 1nswA
TM-score=0.728 to native
SCOP code=c.47.1.1		 TM-score=0.624 to 1nswA
TM-score=0.907 to native
SCOP code=c.47.1.1

  Experimental Structure

Download 3qouA
SCOP code=c.47.1.1