Template-based Modeling Results for YAJO_ECOLI

Submitted Primary Sequence

>Length 324
MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK
CCCEECCCCCCEEECEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK
532121142202002000001111323212122212131022002100400010000020113021030002003311322100000000132132231001110120012003302210000000021133010210030022005201000000020101100100200432111300011121101223202100200242100000001002120123123222322223213122332232012002201100441302100000000022320000000013231013004103030233002102301322222234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSRAQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMHASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARGRLTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSKPGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK
1	MUSTER	3eb4A	0.307	0.966	3.272	threading_1	QFYRNLGKSGLRVSCLGLGTVTFG--------GQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGRRSSLVITTKIFWGGAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPRCEQAEYHMFREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVKLSSSIVHEIDSILGNKPYS---
2	SPARKS	3n6qa	0.367	0.907	5.234	threading_2	MQYRYCGKSGLRLPALSLGLWNFGH--------VNALESQRAILRKAFDLGITHFDLANNYGPGSAEENFGRLLREDAYRDELIISTKAGYDMWPGPSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKI-PLLIHQPSYNLLNRWVDKSLLDTLQNNGVGCIAFTPLAQGLLTGKY------------------LLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNLTFSTKELAQIDQHIADGELN---
3	PROSPECT2	3erpA	0.320	0.907	4.536	threading_3	MEYRRCGRSGVKLPAISLGLWHNFG-------DTTRVENSRALLQRAFDLGITHFDLANNYGPGSAECNFGRILQEDFWRDELIISTKAGYTMWDGPYWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGT-PCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNIT-----------------ADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLNRRFSAAECAEIDAILEGR-----F
4	PPA-I	3eb4A	0.303	0.969	5.717	threading_4	QFYRNLGKSGLRVSCLGLGT-------WVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGRRSSLVITTKIFWGGAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPRCEQAEYHMFQREVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVKLSSSIVHEIDSILGNKPYS---
5	HHPRED-l	1lqa_A	0.295	0.972	2.820	threading_5	MQYHRIPHSSLEVSTLGLGTMTFGEQ--------NSEADAHAQLDYAVAQGINLIDVAEMYPQGLTETYVGNWLAKHGSREKLIIASKVSGPSRRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKPAGARTLFSRFTRYSGEQTQKAVAAYVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEIEAVHQVYTYPAP-
6	HHPRED-g	2bp1_A	0.269	0.929	2.500	threading_6	------------RVASVLGTMEMGR--------RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGDCRVKIATKANP-W--DGKSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPLAGGLLTGKYKYEDKQPFGNSWAEFWKEHHFEAIALVEKALQAAYGASAPSVTSAALRWMYHHSQLQAVILGMSSLEQLEQNLAATEEPLEPAVVDAFNQAWHAHECNYFR
7	SP3	3n6qa	0.367	0.907	5.213	threading_7	MQYRYCGKSGLRLPALSLGLWNFG--------HVNALESQRAILRKAFDLGITHFDLANNYGPGSAEENFGRLLREDAYRDELIISTKAGYDMWPGPYGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKI-PLLIHQPSYNLLNRWVDKSLLDTLQNNGVGCIAFTPLAQGLLTGKY------------------LLTEANLNSLRLLNEMAQQRGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNLTFSTKELAQIDQHIADGELN---
8	SAM-T99	3eb4A	0.313	0.966	3.656	threading_8	MLYRNLGKSGLRVSCLGLGTWTFGGQ--------ITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKWRRSSLVITTKIFWGGKETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPRCEQAEYHMFQREKEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVKLSSSIVHEIDSILGNK---PYS
9	MUSTER	1pz0A	0.334	0.941	3.262	threading_9	-KKAKLGKSDLQVFPIGLGTNAVGGHNLY---PNLNEETGKELVREAIRNGVT-LDTAYIYGIGRSEELIGEVLREF-NREDVVIATKAAHRKQGNDFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNE-KKAGKIRSIGVSNFSLEQLKEANK------DGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEHFKGERFKENIRKVNKLAPIAEKHNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQEDISFIDKLFAPG------
10	SPARKS	3erpa	0.323	0.907	4.935	threading_10	MEYRRCGRSGVKLPAISLGLW-------HNFGDTTRVENSRALLQRAFDLGITHFDLANNYGPGSAECNFGRILQEDFWRDELIISTKAGYTMWDGPYWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGT-PCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLNIT-----------------ADKLEKVRRLNELAARRGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLNRRFSAAECAEIDAILEGRF-----

Predicted Tertiary Structure


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TM-score=0.860 to 1lqaA SCOP code=c.1.7.1	TM-score=0.860 to 1lqaA SCOP code=c.1.7.1	TM-score=0.836 to 1ur3M SCOP code=c.1.7.1	TM-score=0.834 to 1ur3M SCOP code=c.1.7.1	TM-score=0.871 to 1lqaA SCOP code=c.1.7.1