Template-based Modeling Results for YAIV_ECOLI

Submitted Primary Sequence

>Length 207
MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY
CCHHCCCHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCEEEEEECEEEEEECCCCEEEECCCCCEEEEHHHHCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY
433222123200200300141011021343210101232344100000200010113231000002011000001000433120200022201001010320120033220021001000100100011012111120121011001101323332423110021023214013200120021024211020120100213412348
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNNEDTFVILEGVISLRREENVLIGITQAPYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQTITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPSEY
1	MUSTER	2gauA	0.152	0.986	2.537	threading_1	LGHLLRDWSLLEEERELLDKEIQPFPCKKA-STVFSEGDIPNNLFYLYEGKIKILR-RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIIDRL-QKT
2	SPARKS	3mzha	0.147	0.986	3.386	threading_2	MDEILARAGIFQSAIAALTKQLQPVDFPRG-HTVFAEGEPGDRLYIIISGKVKIGRGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRGGALRVTHDLQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISD--SERL
3	PROSPECT2	1hw5a	0.137	0.952	2.569	threading_3	VLGKPQTDPTLEWFL----SHCHIHKYPSKSTL-IHQGEKAETLYYIVKGSVAVLIKDEMILSYLNQGDFIGELGLFEEGQRSAWVRAKTACEVAEISYKKFRQLIQVNPILMRLSAQMARRLQVLAEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGT-----
4	PPA-I	2gauA	0.143	0.981	3.138	threading_4	LGHLLRDVWSLEEERELLDKEIQPFPCKKA-STVFSEGDIPNNLFYLYEGKIKILR-RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNTFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENDGATLREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIID--CDRL
5	HHPRED-l	2gau_A	0.164	0.971	2.666	threading_5	LRDVWSLLNEE--ERELLDKEIQPFPCKKA-STVFSEGDIPNNLFYLYEGKIKILR-RFHISRIVKPGQFFGMRPYFAEETCSSTAIAVENSKVLAIPVEAIEALLKGNSFCRYFLKALAKELGYAERRTVTLTQKHVRGRLAETLLILKENFGFENLSILSREELATLSNMTVSNAIRTLSTFVSERMLALDGKRIKIID-CDRL-
6	HHPRED-g	3e97_A	0.145	0.966	2.351	threading_6	RLDDLKRSPLFQNVPEEALKVVTE-RNFQPDELVVEQDAEGEALHLVTTGVVRVS--RERVLGDIYAPGVVGETAVLAHQERSASVRALTPVRTL-LHREHFELILRRHPVLWNLAE-LARRVTFLNDELIAFG-QNTEAALTHVFANLYRQRLAPEVLPLGTQDI-ARTSSSRETVSRVLKRLEAHNILEVSPRSVTLLDLAALEA
7	SP3	3mzha	0.147	0.986	3.343	threading_7	ILARAGIFQGVPSAIAALTKQLQPVDFPRG-HTVFAEGEPGDRLYIIISGKVKIGRGRENLLTIMGPSDMFGELSIFDPGPRTSSATTITEVRAVSMDRDALRSWIADRPISEQLLRVLARRLRRTNNNLADLIFTDVPGRVAKQLLQLAQRGGALRVTHDLQEEIAQLVGASRETVNKALADFAHRGWIRLEGKSVLISD--SERL
8	SAM-T99	2oz6A	0.168	0.918	2.683	threading_8	MKLKH---------LDKLLAHCHRRRYTAKSTIIYAGD-RCETLFFIIKGSVTILIEDDDGIGYLNSGDFFGELGLFEQE-RSAWVRAKVECEVAEISYAKFRELSQQDSEILTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDADGMQIKTRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFG------
9	MUSTER	2oz6A	0.162	0.923	2.478	threading_9	-MK--------LKHLDKLLAHCHRRRYTAK-STIIYAGDRCETLFFIIKGSVTILIEREMIIGYLNSGDFFGELGLFEQ-ERSAWVRAKVECEVAEISYAKFRELSQQDEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQPDAMTHPDGMRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGT-----
10	SPARKS	2xgxa	0.153	0.947	3.247	threading_10	-----------NSLLTMFRELPLQIEQFERGKTIFFPGDPAERVYLLVKGAVKLSRGEEITVALLRENSVFGVLSLLTRSDRFYHAVAFTPVQLFSVPIEFMQKALIERPLANVMLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDPDGITIDLKLHQAIAEAIGSTRVTVTRLLGDLRESKLIAIHKKRITVFNPLSQQF

Predicted Tertiary Structure


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TM-score=0.925 to 2gauA SCOP code=a.4.5.4	TM-score=0.877 to 2gauA SCOP code=a.4.5.4	TM-score=0.857 to 2gauA SCOP code=a.4.5.4	TM-score=0.847 to 2oz6A SCOP code=a.4.5.4	TM-score=0.916 to 2gauA SCOP code=a.4.5.4