Template-based Modeling Results for YAIP_ECOLI

Submitted Primary Sequence

>Length 398
MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA
CEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEEHHHHHHCCCCCCCEEEHHHHHHHHHHCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA
31000000000000010012133333343110000000112130012002101432120100000110222021002202431221000013322110000110011021100000101120111210001001312422100000000013221112102001200110022001110101100000000001120033020233110100100010022012010013000012123203300330211011001002101310021000000000000000000000000000001000000000000000000000000000101200100000000000000000000000000001123233233141111021122222222212332234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTWIFICMSIAMLLWFLSTLRRKPSQKKGCIDAIIPAYNEGPCLAQSLDNLLRNPYFCRVICVNDGSTDNTEAVMAEVKRKWGDRFVAVTQKNTGKGGALMNGLNYATCDQVFLSDADTYVPPDQDGMGYMLAEIERGADAVGGIPSTALKGAGLLPHIRATVKLPMIVMKRTLQQLLGGAPFIISGACGMFRTDVLRKFGFSDRTKVEDLDLTWTLVANGYRIRQANRCIVYPQECNSPREEWRRWRRWIVGYAVCMRLHKRLLFSRFGIFSIFPMLLVVLYGVGIYLTTWFNEFITTGPHGVVLAMFPLIWVGVVCVIGAFSAWFHRCWLLVPLAPLSVVYVLLAYAIWIIYGLIAFFTGREPQRDKPTRYSALVEASTAYSQPSVTGTEKLSEA
1	SPARKS	3bcva	0.219	0.470	2.931	threading_1	---------------------------LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSIEIILIDDESPDNCPKICDDYAAQYPN-IKVIHKKNAGLG-ACNSGLDVATGEYVAFCDSDDYVDSDYTYNVAQKY----TCDAVFTFKLYKNKNE-IHTLLKDLIASDPYAREERAIQV--------SAKVVLYRRNLIEKKHLRRILPSEDLIFNVDVLANSNIVCVLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2	HHPRED-l	1xhb_A	0.114	0.859	4.076	threading_2	----------------NRSLPDVRYPDNLPTTSVVIVFHNEASTLLRTVHSVINRSPREEIVLVDDASERDFLRPLESYVKKLKVPVHVIREQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTV-VCPIIDVISDDTSNWKLNFRWYPVPQREMDRRKGDTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMGENLEISFRIWQCGGTLEIVTCSHVGHVF-----IINKNNRRLAEVWMDEF---KNFFYIIYGDPFSWYLENI--YPDSQIPRHYFSLGEINVET--------NQCLDFNCHGMSYTANKE-IRT------D-------------DLCLDVCHHLKGNQLWEYDPVKLTLQHVNSNKATEEDSQVPIRD-
3	PPA-I	2z86C1	0.185	0.585	1.960	threading_3	---------TLPPYVWAGKRKELDDQLIIDGLSIVIPTYNRAKILAITLACLCNQKTIYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPGKE------------------------------------------------------------------------------------------------------------------------------------------------------------
4	HHPRED-g	2z86_A	0.146	0.912	3.522	threading_4	AATKIMCSNAKYREITAKKKRKE---LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYEVIVADDGSKENIEEIVREFESL-LNIKYVRQKDYYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLI--DWRIEHFKNNLNTPFRFFSGGNVAFAKKWLFRGWFDEEFTGEDNEFGYRLYREGCYFRSVEGAMAYHQEPP----------------QL-LQQKVPYFYRKKEKIESKRVPLVSAYNC-SKYIVRCVESALNQTDDTLRILQEHYKGIGSASNTAVRL-CRGFYIGQFLE-PDAVELCLDEF--RKDLSLACVYTTNNIDREG-NLIS---NGYNWPI---YSREKICHH
5	SP3	3bcva	0.219	0.470	2.265	threading_5	---------------------------LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSIEIILIDDESPDNCPKICDDYAAQYPN-IKVIHKKNAGLG-ACNSGLDVATGEYVAFCDSDDYVDSDY--TYNVAQKYTCD--AVFTFKLYKNK-NEIHTLLKDLIASDPYAREERAIQV--------SAKVVLYRRNLIEKLRFVSERISEDLIFNVDVLANSNIVCVLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PROSPECT2	1xhbA	0.107	0.796	2.541	threading_6	L----------------EGCKTKVYPDNLPTTSVVIVFHNEWSTLLRTVHSVINRSPREEIVLVDDASERDFLPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMANFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMGENLEISFRIWQCGGTLEIVTCSHVGHVFGQIINKNNRRLAEWMDEFKNFFYIISPGVTKVDYG-----------------------------------------------------------------DISSRLGLRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQKATEEDSQVLLRNV
7	SAM-T99	3bcvA	0.227	0.465	4.758	threading_7	---------------------------LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSIEIILIDDESPDNCPKICDDYAAQYPN-IKVIHKKNAGLG-ACNSGLDVATGEYVAFCDSDDYVDSDY--TYNVAQKY--TCDAVFTFKLYKNKNHTLLKD------LIASDPYAREERAIQVSAKVV-----LYRRNLIEKKHLFVSLPSEDLIFNVDVLANSNIVCVLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	HHPRED-l	2d7i_A	0.130	0.947	4.042	threading_8	YRENGFNIYVSDKISLNRSLPDIRHLETLPNTSIIIPFHNEGSSLLRTVHSVLNRSPPAEIVLVDDFSDREHLKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETGFDWEMYYKRIPIPPKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVRNLKRVAEVWMDEYAEYIYQRRPKLRSSLNKSFKWFMTKI--AW-----DLPKFYPPVEAAWGEIRNVGTGLCADEGCVRG----RGEAAWN----NMQVFTFTDIRDPVTLYD---C-HSMKGNQLWKYRK-DKTLYHPVSGSCCSESDHRIMNT-
9	MUSTER	2z86C1	0.188	0.575	1.151	threading_9	TND----------YVWAGKRKELDDQLIIDGLSIVIPTYNRAKILAITLACLCNQKTDYEVIVADDGSKENIEEIVREFESLLNIKYVRQKDYGYQLCAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGFDEEFTGEDNEFGYRLYREGCYFRSVEGAMAYHQEPE---------------------------------------------------------------------------------------------------------------------------------------------------------------
10	HHPRED-g	1xhb_A	0.107	0.912	3.332	threading_10	-----------------NRSLPKVYPDNLPTTSVVIVFHNEASTLLRTVHSVINRSPREEIVLVDDASERDFLRPLESYVKKLKPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFKLNFRWYPV---PQREMDRRKGTLPV-RTPTMAGGLFSIDRDYFQEGTYDAGMDGENLEISFRIWQCGGTLEIVTCSHVGHVF---GQIINKNNRRLAEVWMDEFKNFFYII-SPKVDYGDISSRLGLCKPFSWYLEPDS------QIPRHYFSLGEIRVETNQCLDNMARKENEKVFNCHGMGNQVFSYKEIRTDD---LCLDVSHHLKGNQLWEYDPVKLTLHVNSNQCLD-KATEEDSQVP

Predicted Tertiary Structure


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TM-score=0.591 to 1h7qA SCOP code=c.68.1.1	TM-score=0.514 to 1xhbA SCOP code=b.42.2.1	TM-score=0.741 to 1xhbA SCOP code=b.42.2.1	TM-score=0.581 to 1h7qA SCOP code=c.68.1.1	TM-score=0.610 to 1h7qA SCOP code=c.68.1.1