Template-based Modeling Results for YAIO_ECOLI

Submitted Primary Sequence

>Length 257
MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF
CCHHHHHHHHHHHHCHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCEEEEHHHHCCCCEEECCCEEEEECCEEEECCCCCEEECCCCCEEEEECCEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCHHHEHHHCCCCCHHEEEECCCCCCEECCCCCCCCCCCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF
43230110000010011101111010001111122321222010020023132120000012132223232121120200000101210211100001331100012213321201001210000112002113201010131000000010000010111223322221010000102234221000000020222121311221221213000133222122100010210211120222312102000201134
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKRTLLAAAIFSALPAYAGLTSITAGYDFTDYSGDHGNRNLAYAELVAKVENATLLFNLSQGRRDYETEHFNATRGQGAVWYKWNNWLTTRTGIAFADNTPVFARQDFRQDINLALLPKTLFTTGYRYTKYYDDVEVDAWQGGVSLYTGPVITSYRYTHYDSSDAGGSYSNMISVRLNDPRGTGYTQLWLSRGTGAYTYDWTPETRYGSMKSVSLQRIQPLTEQLNLGLTAGKVWYDTPTDDFNGLQLAARLTWKF
1	PROSPECT2	1yvvA	0.086	1.000	1.211	threading_1	TVPAGLSAAQALTKSRGSGGRSSKRSDAGALDGAQYFTARDRRFATAVKQWQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGSAITRARGDPVSFSCRITEVFRGDAEGQNHGPFSHVIIATPAPQASTLLAAAPKLASVVAGVKDPTWAVALAFETPLQTPQQDSPLDWLARNRSKPERDDTLDTWILHATSQWNLDASREQVIEHLHGAFAELIDCTPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYQL
2	HHPRED-g	3pgu_A	0.147	0.953	1.081	threading_2	AIAD--DAGNVS-RNPALTMFPTFSAGANISGTSPRADNIPVPNMHFVAPI-NDQFGWGASILATEFNDTDLETMNLNLSGAYRLNNAWSFGLGFNAVYARAKIERFGWNAGILYELDKNNRYALTYRSEDFKG--TLEMWEVSGYNRVPQWAYSLAYTSWSQFQQLEGFKDAYRIAL----GTTYYDNWTF--RTGIAFDDSPVAQDQDRFWLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGAWLF
3	PROSPECT2	1bwza	0.081	0.868	1.076	threading_3	MFTPETIRRLAVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTL-------------KGLTNKKDISVSTQKGNMVLTVKDM----NQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVL-------------CGAVSMGNPHCVVQVDDIQTASHERFPERVNAGFMQIINKEHIKLRVYERGA----GETQACGSGACAAVAVGIMQGLLNNNVQVDLPGGSLMIEWNGVGHPEATHIYDGFITL
4	PROSPECT2	1s8eA	0.091	0.988	1.044	threading_4	MEEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTQRGPSVLNGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMMLHQGVREVSEARGEDYFEIGEGYLYYAKRYETSYSGSPVVYPGSLERWDYEVRYEWDGIKFGVNKGFYIVEDFKPRFVEIKVRPSEEEIRKAIKRLIPLIPKNAYVRL---NIGWRKPFDLTENVEYLKIDTWRI
5	PROSPECT2	1sqjA1	0.100	0.817	1.039	threading_5	M--------------------------------GRNNGER------LAVNPFNSNEVWMGTRTETNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHD--GGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGA-------WDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSITQLSSPSNLEGNW
6	PROSPECT2	3ohgA	0.085	0.872	1.038	threading_6	GPQTAIGRQLVESGALNELTFTPATKDDKNVPATGPESSAPLPIHAFAAEANGKTVWLGVNGDYYADNPRRVGLFYKDGVCINSQYFEGHDEVLYQLKNGETYVGQADEALAHEANLL--------------------------HALGGYGLLVKDGVVQNFYEEGDLQNTHPRTSVGLSQDRKTYVFVVDGRRKDSFFALGLTLPH-------LATKAVGCYNAINLVNDGGKPTFPILNTPADDRVTNSLIIEKK
7	MUSTER	3qfmA	0.173	0.879	0.609	threading_7	MTKIALLTTALEAVLARQLGVDEYWLLGDILMP----GTGRRRILDLLDQLPITARVLGLWHGVRK-ELDSTRPSQRYLLRQCQYVLEEISLEEIEVLHNQPLQIHRQFG-DLTVGISHHLPKNWGRELIHTGKQEEFDRLPCDIAVYGHIHQQLLRYGTGGQLDAQLRKDLRAQYMILEFDDKGLVDMDFRR-----DYDVAAELQ--LAKDLRLPYFEVYYESLVNGI--------HHTHHQEFL----------
8	SPARKS	2v74b	0.113	0.961	0.897	threading_8	MMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGQAGSTMAQHAEVLVKSNNLTDRIVVIPGKEEVSPEQVDIPMGYMLFNEHAKKYLKPSGNMFPTIGDVHLAYMEQFTKANFWYQPSFH---GVDLSALRGAAVDEYFRQPVVDTFDILMAKSVKYTVNFLEAKEGDLHRIEIPFKHMLHSGWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRC----LFQSPLFA--KAGDTCLLIANKR-QSYDISIVAQVDQ
9	PROSPECT2	1eerb	0.116	0.770	1.036	threading_9	DPKFESKAALLAARGP--EELLCFTERLEDLEEAASAGVGP----------GQYSFSYQLEDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVTAASGAPRYHRVIHINEVVLLDAPVGL-----------------------VARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRVEILEGRT---------------ECVLSNLRGRTRYTRMAEPSFGGFWSEWSEP---------VSLLT
10	PPA-I	2xbgA	0.120	0.911	0.598	threading_10	LMETR------------DGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGN----GSAEMITNVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEVAVSSRGSFYSTWEPGQTAWEPHN-----RTTSRRLHNMGFTPDGRVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAGQTWQQDVDVKKVPSNFYKILFFSP

Predicted Tertiary Structure


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TM-score=0.736 to 2iveA SCOP code=c.3.1.2	TM-score=0.512 to 2fgrA SCOP code=f.4.3.1	TM-score=0.691 to 2gkjA SCOP code=d.21.1.1	TM-score=0.729 to 1s8eA SCOP code=d.159.1.4	TM-score=0.678 to 2ebsB SCOP code=b.69.13.1