Template-based Modeling Results for YAHG_ECOLI

Submitted Primary Sequence

>Length 472
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
CCHHHCCCCCEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCEEHHHHCCCCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
5443112331100000021002104523120010111111312130020022013121231013003200210141200001011012102212120000000101132000101000000000210031132012003212010000121201011000001100000011322211000101330030021102131003002001210010023003212302021000200310220021010000000210010014012223112200210120110000000000100011123032000000003102100010021212001010321202102112131001200100001000000000000110011021213201200210230012311202011001210000000120031100000000001220010100000010111001300210034235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQSLFSQPLNVINVGIAMFSDDLKKQHVEVTQLDWTPPGQGNMQVVQALDNIADSPLADKIAAANQQALERIIQSHPVLIGFDQAINVVPGMTAKTILHAGPPITWEKMCGAMKGAVTGALVFEGLAKDLDEAAELAASGEITFSPCHEHDCVGSMAGVTSASMFMHIVKNKTYGNIAYTNMSEQMAKILRMGANDQSVIDRLNWMRDVQGPILRDAMKIIGEIDLRLMLAQALHMGDECHNRNNAGTTLLIQALTPGIIQAGYSVEQQREVFEFVASSDYFSGPTWMAMCKAAMDAAHGIEYSTVVTTMARNGVEFGLRVSGLPGQWFTGPAQQVIGPMFAGYKPEDSGLDIGDSAITETYGIGGFAMATAPAIVALVGGTVEEAIDFSRQMREITLGENPNVTIPLLGFMGVPSAIDITRVGSSGILPVINTAIAHKDAGVGMIGAGIVHPPFACFEKAILGWCERYGV
1	MUSTER	3clqB	0.657	0.847	2.943	threading_1	----------------------------------------------------SNAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITYEN-CGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDATFCPEGIDLR-LLSQAL-HGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFSGPT-WGAAKCALDAGHNVENSTIVTTC-RNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKEL-EITTKENPNVTIPVLDF-GIPTGIDVLKVLETGL-PVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
2	SPARKS	3clqa	0.647	0.845	3.678	threading_2	-----------------------------------------------------NAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITYE-NCGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLI-WRDVLGPLLHDATFCPEGIDLR-LLSQAL-HGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFS-GPTWGAAKCALDAGHNVENSTIVTTC-RNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFAA-AAPAIVPLVGGTVAEALNYSKEL-EITTKENPNVTIPVLDF-GIPTGIDVLKVLETGL-PVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
3	PROSPECT2	3clqA	0.642	0.845	4.164	threading_3	NAPTL-----------------------------------------------------YEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITYENCGP--KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIWR-DVLGPLLHDATFCPEGIDLRLL--SQALHGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFSGPT-WGAAKCALDAGHNVENSTIVT-TCRNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKEL-EITTKENPNVTIPVLDF-GIPTGIDVLKVLETGL-PVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
4	PPA-I	3clqB	0.652	0.847	7.136	threading_4	----------------------------------------------------SNAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITYENCGP--KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDATFCPEGIDLR-LLSQAL-HGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFSGPT-WGAAKCALDAGHNVENSTIVTTC-RNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKEL-EITTKENPNVTIPVLDF-GIPTGIDVLKVLETGL-PVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
5	HHPRED-l	3clq_A	0.676	0.843	10.561	threading_5	-----------------------------------------------------NAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINV-PD-TETTILHAGPPITYEN-CGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPN-YVHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDA-TFPEGIDLRL-LSQALH-GDECHNRNVAGSTLLVQALTPY-VQTDFSREQLKEVFEFLGSSDYFSGPTW-GAAKCALDAGHNVENSTIVTT-CRNGVEFGIRVSGIGGHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKE-LEITTKENPNVTIPVLDF-GIPTGIDVLKVLETG-LPVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
6	HHPRED-g	3clq_A	0.676	0.843	9.017	threading_6	-----------------------------------------------------NAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINV-PD-TETTILHAGPPITYEN-CGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPN-YVHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDA-TFPEGIDLRL-LSQALH-GDECHNRNVAGSTLLVQALTPY-VQTDFSREQLKEVFEFLGSSDYFSGPTW-GAAKCALDAGHNVENSTIVTT-CRNGVEFGIRVSGIGGHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKE-LEITTKENPNVTIPVLDF-GIPTGIDVLKVLETG-LPVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
7	SP3	3clqa	0.642	0.845	1.607	threading_7	-----------------------------------------------------NAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITY-ENCGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIWRD-VLGPLLHDATFCPEGIDLR-LLSQAL-HGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFS-GPTWGAAKCALDAGHNVENSTIVTTC-RNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFAA-AAPAIVPLVGGTVAEALNYSKEL-EITTKENPNVTIPVLDF-GIPTGIDVLKVLETGL-PVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
8	SAM-T99	3clqB	0.650	0.847	9.716	threading_8	----------------------------------------------------SNAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVP--DTETTILHAGPPITYENCGP--KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPN-YVHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDATFCPEGIDLRLLSQA--LHGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFSGPTW-GAAKCALDAGHNVENSTIVTT-CRNGVEFGIRVSGIGNHWFTGPAQRVIGP-FAGYTQEDAGLD-GDSAITETYGVGGFA-AAAPAIVPLVGGTVAEALNYSKE-LEITTKENPNVTIPVLDF-GIPTGIDVLKVLETG-LPVINTAIAHKEPGIG-IGAGLTNPPANVFNEALKALVATIN-
9	MUSTER	3clqB1	0.653	0.500	1.568	threading_9	----------------------------------------------------SNAPTLYEKIQQANEEAVTRIIQSKPILVGFDKAINVPD--TETTILHAGPPITYEN-CGP-KGAVQGALVFEGLAKDLADADRVARSGAITFSPCHEHDAVGS-AGVTSPNY-VHIIKNETYGNTAFTNLSEQLAKVLRFGANDQSVVDRLIW-RDVLGPLLHDATFCPEGIDLR-LLSQAL-HGDECHNRNVAGSTLLVQALTPYV-QTDFSREQLKEVFEFLGSSDYFS-GPTWGAAKCALDAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10	SPARKS	1ee4a	0.127	0.852	0.553	threading_10	MTQQLNSDDMQEQLSATVKFRQILSREHRPPID---VVIQAG---VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQ--LLYTGSVEVKEQAIWALGNVA---------GDSTDYRDYVLQCN-----------AMEPILGLFNSNKPTWTLSNLCRGKKPQPDVSQALPTLAKLYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPK---ENIKKEACWTISNITAG-NTEQIQAVIDANLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQ---RPDIIRYLVSQ----GCIKPLCDNRIIEVTLDALENILKMGEADKEA---------------RGLNINENADFIEKAGGMEKIFNCQQNEN--------------DKIYEKAYKIIETYF--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.377 to 1e9iD SCOP code=c.1.11.1	TM-score=0.374 to 1e9iD SCOP code=c.1.11.1	TM-score=0.383 to 1e9iD SCOP code=c.1.11.1	TM-score=0.378 to 1e9iD SCOP code=c.1.11.1	TM-score=0.377 to 1mnsA SCOP code=c.1.11.2