Template-based Modeling Results for YAHD_ECOLI

Submitted Primary Sequence

>Length 201
MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
554442201000002211120010002100213221331200000003231210010002100212331322100000002231120010002130213221321000000002301110010001213021323132120000000122322231210010003200223231321200000022211330010002223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSIKNLPADYLLAAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCLNPFLISCLNDDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA
1	MUSTER	3hraA	0.313	0.985	3.620	threading_1	--TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN-
2	SPARKS	3hraa	0.313	0.985	4.047	threading_2	--TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN-
3	PROSPECT2	3hraA	0.313	0.985	4.103	threading_3	--TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN-
4	PPA-I	3hraA	0.313	0.985	3.993	threading_4	--TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN-
5	HHPRED-l	2fo1_E	0.231	0.925	2.169	threading_5	VNIRHNRTVLHWIASNSSAEKSEDLIAAGADVNA-DCDENTPL-LAVLARRRRLVAYL-KAGADPTIYNKSERSALHQAAANRDFG--VY-LNSTKRKDSEKYKGRTALHYAAQVSN-PIVKYLVGEKGSNKDKQDEDGKTPI-LAAQEG-----RIEVV-YLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR-
6	HHPRED-g	2fo1_E	0.220	0.925	1.809	threading_6	IDPRHNRTVLHWIASNSSAEKSEDLIVAGADVNA-DCDENTPL-LAVLARRRRLVAYL-KAGADPTIYNKSERSALHQAAANRDFG--VY-LNSTARKDSEKYKGRTALHYAAQVSN-PIVKYLVGEKGSNKDKQDEDGKTPI-LAAQEG-----RIEVV-YLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR-
7	SP3	3hraa	0.313	0.985	4.231	threading_7	--TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN-
8	SAM-T99	1n0rA	0.344	0.622	2.815	threading_8	-------------------------------------NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL-EAGADVNAKDKNGRTPLHLAARNGH-----LEVVKLLLEAGA---------------------------------
9	MUSTER	2f8yA	0.241	0.970	3.309	threading_9	QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRADLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAAREG-----SYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL
10	SPARKS	3utma	0.230	0.975	3.941	threading_10	ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHGANVNEKNKDFMTPLHVAAERA-----HNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS

Predicted Tertiary Structure


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TM-score=0.853 to 1k3zD SCOP code=d.211.1.1	TM-score=0.850 to 1k3zD SCOP code=d.211.1.1	TM-score=0.853 to 1k3zD SCOP code=d.211.1.1	TM-score=0.853 to 1k3zD SCOP code=d.211.1.1	TM-score=0.853 to 1k3zD SCOP code=d.211.1.1