Template-based Modeling Results for YAHB_ECOLI

Submitted Primary Sequence

>Length 310
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
CCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEECCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCHHHCCCCCCCHHHHHCCCEEEEECCCCCCCCCCCCEECCCCEEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
5432121300100100042000120033021020001100330031130100212222120031021003201300310230231022024223020100013102112000300220243013010100122132001001223000000012221322101001003120000002302002232202321033110000212122133321110212200001102010000230100000020002201332100112142233202000002322203002100310132210211122124434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLHREN
1	MUSTER	3fxrA	0.138	0.935	2.244	threading_1	---MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAI-ALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT---RLAELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHLPVTPAAAGLIRWIQHHAL-------------
2	SPARKS	3fxra	0.138	0.935	4.217	threading_2	---MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAI-ALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT---RLAELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDPVTPAAAGLIRWIQHHAL-------------
3	PROSPECT2	1iz1a	0.161	0.923	3.451	threading_3	M----EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTP-IYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRF--FPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPSFADEVIGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHV--------------RRSA
4	PPA-I	3fxrA	0.138	0.935	4.148	threading_4	---MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAI-ALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANATRL---AELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNTIYVLRRHDLPVTPAAAGLIRWIQHHAL-------------
5	HHPRED-l	1al3_A	0.125	0.697	3.494	threading_5	-----------------------------------------------------------------------------------------TWPDKGSLYVATTHTQ-ARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEAL-HLYDDLVMLPCYHWNRSIVVTPEHPLATK-GSVSIEELAQYPLVTYTFGFTGRSELDTAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVD-PVSDPDLVKLDANGIFSHSTTKIGFRSTFLRSYMYDFIQRFAPHLTRDVVDTAVALRS-
6	HHPRED-g	3hhg_A	0.192	0.926	2.911	threading_6	---KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMV-LHLLAPLAAKFNERYPHIRLSLVSSE--GYI-NLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPEYLAKH-GTPQSTEELAGHQCLGFTEPGSLNTWAVLDPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLEQTSDKTHPFNAVYYSDKVNLRLRVFLDFLVE------ELG-------
7	SP3	1iz1a	0.157	0.923	4.322	threading_7	M----EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPI-YRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPSFADEVIGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA--------------
8	SAM-T99	3hhgE	0.196	0.919	4.746	threading_8	--MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLH-LLAPLAAKFNERYPHIRLSL--VSSEGYINLIERK-VDIALRAGEL--DDSGLRARHLFDSRFRVIASPEY-LAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQSDKTHPFNAVYYSDKVNLRLRVFLDFLVE----------------
9	MUSTER	3ispA	0.165	0.919	2.128	threading_9	---QLDGPQLAALAAVVELGSFDAAAERLHVTPSAVSQRIKSLEQQVGQVLVVR-EKPCRATTAGIPLLRLAAQTALLESEALAEMG--ASLKRTRITIAVN-----ADSMATWFSAVFDGLGDVLLDVRIEDQDHSARLLREGVAMGAVTTERN--PVPGCRVHPLGEMRYLPVASRPFVQRHLSDGFTAAAAAKAPSLAWNRDDGLQDRKAFRRAITRPTHFVPTTEGFTAAARAGLGWGMFPEKLAASPLADGSFVRV---CDIHLDVPLYWQCWKLDSPIIARITDTVRASGLYRGQ---------
10	SPARKS	1iz1a	0.150	0.923	4.181	threading_10	----MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTP-IYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGK-FGKTCKLADLRAVELTLFPRGGRPSFADKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA--------------

Predicted Tertiary Structure


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TM-score=0.657 to 2esnC SCOP code=a.4.5.37	TM-score=0.659 to 2fyiC SCOP code=c.94.1.1	TM-score=0.662 to 2esnC SCOP code=a.4.5.37	TM-score=0.779 to 1iz1B SCOP code=a.4.5.37	TM-score=0.653 to 2esnC SCOP code=a.4.5.37