Template-based Modeling Results for YAHA_ECOLI


  Submitted Primary Sequence

>Length 362
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
CCCCEEEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHCCCCHHHHHHHHHHHHCCCHHHEEEEEEHHHHHCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCEEECHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
54421010002211112312122002211210120022012222110010000000013433103200100010102211132113102322120010013101110100310130044211100010000042110000100010201220200021000002200100200200022001201202431233010000000111232101320130043121222101010012002211220220021035120100000101000002002201221010120002201224200100100020035010100021121331021022220320100000210203200121123235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG
1MUSTER3ii8B0.3190.7022.807threading_1-------------------------------------------------------------------------------------------------------HERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT--DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQKAS
2PROSPECT23pjwA0.1760.8954.577threading_2IRGGEFAVLAPGMTR------EEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFA-HGDSPQAVLSLGDQALAQ----------AEGQGEQNWACLDGDD--HHAWHRLLDQALNQRRFELFFQPVVAAQDTQVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGH------EESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQ-AVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKP------------WG
3SPARKS3n3ta0.3200.6995.479threading_3--------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT--DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQKAS
4HHPRED-l3pjx_A0.1770.9065.327threading_4TQNLVTRIRGGEFAVLAPGMTREEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFAHGDSPQAVLSLGDQALAQ----------AEGQGEQNWACLD-----HHAWHRLLDQALNQRRFELFFQPVVAAQDQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGHE------ESLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQ-AVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG------------
5PPA-I3ii8B0.3190.7025.988threading_5-------------------------------------------------------------------------------------------------------HERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRDDLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT--DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQKAS
6HHPRED-g3hvb_A0.2020.6854.778threading_6---------------------------------------------------------------------------------------------------------RGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHRAKGH-QTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIKIDGSFVQDLNQV-ENQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQAMDYDFS-------
7PROSPECT23gfxA0.1950.9094.252threading_7MNGLQFFQVLEGT-----------EEALESLFSEIQSDPRHRDVVELMRDYLDLRLFETDG-ALEEILRFSTFRLLS----------AFIADGGRYCLPEPLQPSRMMPATAAPQHLPGQPCQFALQAIVEPAKKRVSSFEALIRS--PTGG-SPVEMFAAIAAEDRYRFDLESKAYAFALAGQLPL-----GKHQLAINLLPGSYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRPCLNGIGEICWPV---A
8SP33n3ta0.3160.6995.655threading_8--------------------------------------------------------------------------------------------------------ERLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRADLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLVT--DEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGN-LSTPQAADAFASLLDRQKAS
9HHPRED-g3pjx_A0.1740.8874.653threading_9IRGGEFAVLAPGMT------REEALQLAQSLDSALSSLYATGATDVAAVASIGLAPFA-HGDSPQAVLSLGDQALAQ----------AEGQGEQNWACLD-----HHAWHRLLDQALNQRRFELFFQPVVAAQDQLVLHYKVLSRLLDEQGQTIPAGRFLPWLERFGWTARLDRLMLERVLEQMAGHEE------SLALNLSSATLADPQALNKVFEILRAHSNLGARLTLEIGEEQLPEQ-AVLEQLTRRLRELGFSLSLQRFGGRFSMIGNLARLGLAYLKIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAERVETEGELSVIREMGLYGVQGQLFGEPKPWG------------
10SAM-T993ii8B0.3250.6966.917threading_10---------------------------------------------------------------------------------------------------------RLTLDTRLRQALERNELVLHYQPIVELASGRIVGGEALVRWEDPERGLV-PSAFIPAAEDTGLIVALSDWVLEACCTQLRAWQQQGRADLTLSVNISTRQFEGEHLTRAVDRALARSGLRPDCLELEITENVLV--TDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQLPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGLG-EVVAEGIETAQQYAFLRDRGCEFGQGNL-STPQAADAFASLLDRQKAS

  Predicted Tertiary Structure

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TM-score=0.687 to 2basA
SCOP code=c.1.33.1
TM-score=0.657 to 2basA
SCOP code=c.1.33.1
TM-score=0.663 to 2basA
SCOP code=c.1.33.1
TM-score=0.686 to 2basA
SCOP code=c.1.33.1
TM-score=0.663 to 2basA
SCOP code=c.1.33.1