Template-based Modeling Results for YAGW_ECOLI

Submitted Primary Sequence

>Length 547
MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
CCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHCCCCCEEEEEEEEEEEEEEEECCCCCEEECCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEECCCCCEECCCCCCCCCEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEHHCCCCCCCCCHHHEEEECCCCCCEEECCCCCEEEEEECCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHEEEEEEECCCEEECCEEEEEEECCCCCEECCEEEEEEEECCCCCEEEECCCCCCCCEECCHHHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEECCCCEEEEEEEEEEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
5522101010000000000002000021211213111000011122220000101100120101131210212222311100000001111011210010000021131221021120111121021221100121122200000111322141000000200020023022111110200001011011013221021322110101101122000010111300010001122111003122203210001320000100101033321221100000111211011001100010113121020012101101002242221000000120022003112232223200000022221222010101121100021221100000232221223313213331101000000122422101010202022210211000001143230301000000011532222112110332211021001321211212231120020101010102211001001421010201010202020112536
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENNSDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDMWLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLSDAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANLRLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSRSGLSCKMVNYTLQTNGLSNTSIHIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNFFKQMVNLGISDINTKDLFNFRFQNTTSPESGWYEFSTSNTLIIKPRDFSISIISDEYTQTPSREGYVGSGESALDFGYIVTTSGKTAADEVLIKVTGPAQVIGGRSYCVFSSDDGKAKVPFPATLSFITRNGATKTYDAGCDDSWRDMTDALWLTTPWTDISGEVGQMDKTTVKFSIPMDNAISLRTVDDNGWFGEVSASGEIHVQATWRNIN
1	PROSPECT2	1eut_	0.092	0.956	2.198	threading_1	GEPLY---------------TEQDLAVNGREGFPNYRIPALTVTPDGDLLASYDGRPTGIDAPGPNSILQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRE-TGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADI-----TPDPGWRSRFAASGEGIQLRYGPHAGRYTIINAAGAFQAVSVYSDDHGAGEAVGVGMDENKTVELSDGRVLDSARSGYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQG---TIRMSCDDGQTWPVSKVFQPGSMSYSTLTALPDGTEPGTGIRYANFNLAWLGGICAPFTIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLLDASPDWQVQGSVEPLMPGRQAKGQVTITVPAGTTPGRYRVGATLRTSAGNASTTFTVTVDVDSEETAREDGRASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTINEQVADYEINGTTWDGPVASGRRLVALSEQTGHK
2	PPA-I	3h71B	0.095	0.806	1.097	threading_2	--------------------------LPEGAALTEKTDIFE-----------SGRNGKPNKDGIKSYPALLKTDKGT----LIAGADERRLHSSDWGDIGVIRRSEDNITNLRDNPKASDPSIGSPVNIDVLVQDPETKRIFSIYDFPEGKGIFGSSQKEEAYKK-----IDGKTYQILYREGEKGAYTIRENGTVYTPDGKATDYRVVVDPVK------PAYSDKGDLYKGNQLLGNIYFTTNKTSPFRIAKDSY----LWSYSDDDGKTWSAPQDITPVKADWKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWHAGEAVNDNRQVDGQKIHSSTNNRRAQNTESTGDVKLFRGLTGDLQVATSKDGGV---------TWEKDIKRYPQVKDVYVQ----------SAIHTHEGKEYIILSNAGGPKRENGVHLARVEENGELTWLKHNPIQKGEFAYNSLQELGNGETEKGQNAYTLSFRKFNWDFLSKDL-------------------------------
3	PROSPECT2	3a0fA	0.081	0.987	2.132	threading_3	WEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDQYRSPVPMGANDMGRNGGERLAVNPHWT----DELWFGSRTQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVTWQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGNGDTVVVSTLDANGEDSVYLSRDAGNSTPAGAGGNSQKESDAKLRNGTPLPWL---SFQNRGSGIVGFGWWLAAILLDPFSDRLLYIWATDAVSRADSNQAPSEGIEETAILVLKSPPAGPAHLFSGMYDLGGMRHDDFSVPQPMYSKPTFSRNDHPDAGVAGCTQGAYTFVWSPSKADGKGPYTSSDYGKTWTAQTTGIAADRVQANTFYVYVEGDFFVSTDGGKTKKGNGLPCCWTYTGTPVTSNLRAFTALAGSGSSLNPAVFSIGAPQTPNATETLFHNYGGATVISGYGRVYIGMNGRGIG
4	PPA-I	3v4pA	0.087	0.925	1.085	threading_4	----------------YNVDTESALLYQGPHNTLFGYSVVLHSHGANRWLLVGAPTANWLANASVINPGAIYRGKNPGQTCEQLQLGSPNGEPCGKTCLEEQWLGVTLSRQPGENHRWKNIFYIKNENKLPTPPDLRTELSKRIAPCYQDYVKKFGENFAS--------CQAGISSFYTKDLIVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGFRSQHTTEVVQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFTIREEGRVFVYINSGSGAVMNAMETNLVGSDKYAARFGESIVNL---------GDIDNDGFEDVAIGAPQEDDLQGAIYIYNGRADGIS---STFSQRIEGLQISKSLSMFGQSNNGYVDVAVGASAVLLRTRPVVIVDASLSHPESVNRTKFDCVENGWPSVCID-LTLCFSYKGKEVPGYIVLF----YNMSLDVNRKAESPPRFYFSSNGTSDVITGSIQVSSREAQAFMRKDVRDILTPIQIEAAYHLGPHSTEEF
5	PROSPECT2	2cn2A	0.074	0.941	2.117	threading_5	VTSV-----------------PYKWDNVVIGGGGGFPGIVFNETEKDLIYARADILLDHFQDEYSYYGVESIATDPVDPNRVYIVAGYTNDWLPNGAILREKTILPFKGGNPGRSGERLAIDPNDNRILYLGT---RCGNGLWRSTDYGVTWSKVESFPN--------PGTIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGLYITYGDGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIVTSNAW----WPDEYIFRSTDGGATWKNIWEWGYPERILEIDISAAPWLDWGTEKQLPEINPKLGWIGDIEIDPFNSDRYVTGATIYGCDNLECAVLDLVSPPEGAPDLKVGPKKHVPSYSSGTGIDYAELVPNFALVAKAVKAPNSVGGGSVAVAADAKSVIWTPENASPAVTTDNGNSWKVCTNLGGAVVASDRVNFTDTKAPQLPKSVNKIREGGLWRSEKLSNVDTAHVVQDYAIYITGKIDNVLGFFRSDDAAS
6	PPA-I	3s94A	0.107	0.938	1.081	threading_6	-------PLLLYANRRDLRLVDATVGGLEDAAAFSHGLIYWSDVSEEAIKRTEFVQNVVV-SGLLSPDGLACDWLGE----KLYWTDSETNRVSNLDGSLRKVLFWQELDQPRPSSGFM--YWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNTNRQPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT---CKDGATELLLLARRTDLRRISLDTPDFTDIEDIRHAIAIDYDPVEGYIYWTDDEV--RAIRRSFIDGSGSQFVVT---AQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRK----ILISEDLEEPRAIVLDPMVG----YMYWTDWGEIAALDGSDRVVLVNTSLGW----PNGLALDYDEGKIYWGDAKTDKEVMNTDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEVIIDQLPDLMGLKATNVHRV
7	PROSPECT2	1flga	0.070	0.909	2.040	threading_7	VTWEDIA----------------------NDDKTTGDVLQYGMGTHAQRWSPLKQVNADNVFKLTPAWSYSFGDEKQRGQESQAIVSDGVIYVTASYSRLFALDAKTGHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRL-----NGKDSTVTGDVKAPSWPDDRNSPTGKGGAPWQSASFDTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWGNNELVLFDYKAKDGKIVKATAH----------------ADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPG-QKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSMGFRIKRMYDDHVGSLRAMDPVSGKVVW------EHKEHLPLWAGVLATAGNLVFTFDAKSGKELWKFQTGSGIITWEQDGEQYLGVTVGYGG
8	PPA-I	3s8vA	0.089	0.879	1.077	threading_8	---------------------------------VPEAFLLFSRRADIRRISLETNNNNIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRI--EVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG------KPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQSRRSIERANKTSGQNRGHLDYVMDILVFHSSRQSGWNECASSLCLAVPGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRM------VIDEQPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGF----TVVVSIQPYDLSIDIYSR------YIYWTCEATNTRLDGRSVGVVLKGEQDR----PRAIVVNPEKGYMYFTNLQERSPKIERAALD-GTEREVLFFSGLSK----PIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNIL
9	PROSPECT2	1kb0a2	0.067	0.923	2.017	threading_9	TGPAAQAAAAVQRVDGDFIR----------ANAARTPDWPTIGVDYAETRYSRLDQINAANVKDLGLAWSYNLESTRGVEATPVVVDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVG-----AWDGRLIALD-----------AATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNG------FFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG---LVYLPAQNVPV-------NLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAAVVAAPSTYMVDGRQYVSVAVGWGE
10	PPA-I	1w8nA	0.117	0.892	1.069	threading_10	-------------------------------GEPLYTEQDLAVNGREGLTVTPDGDLDGRPTGIGAPGPQRRSTDGGRTWGEQQVVSAG-QTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADI------TPDPGWRSRFAASGEGIQLRYGPHAGYTIINAAGAFQAVSVYSDDHGRTWRAGEAVGNKTVELSDGRVLLNSARSGYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQG---TIRMSCDDGQTWPVSKVFQPGSMSYSTLTALPDGTPGTGIRYANFNICAPFTIPDVALEPGQQVTV------PVAVTNQSGIAVPKPSLQLDASPDWQVQGSVEPLMPGRQAKGQVTITVPAGTTPGRVGATLRTSAGNASTTFTVTVGLLDQARMSIADVDSEETAR-------EDGRASNVIDGNPSTFWHTEWS-RADAPGYPHRISL----DLGGTHTISGLQYTRRQNSAN

Predicted Tertiary Structure


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TM-score=0.602 to 1npeA SCOP code=b.68.5.1	TM-score=0.809 to 1w8nA SCOP code=b.1.18.2	TM-score=0.688 to 1w8nA SCOP code=b.1.18.2	TM-score=0.599 to 1sq9A SCOP code=b.69.4.1	TM-score=0.655 to 2ebsB SCOP code=b.69.13.1