Template-based Modeling Results for YAGT_ECOLI

Submitted Primary Sequence

>Length 229
MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS
5543232333342143323322011210020000000111122322222212222323320101020112202020323200010002204021033102202000000002221010000100312311000021023232112011002412011011000000000010022132222222223222223121310112021000100000200100120032245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNQGEYPEDNRVGKHEPHDLSLTRRDLIKVSAATAATAVVYPHSTLAASVPAATPAPEIMPLTLKVNGKTEQLEVDTRTTLLDTLRENLHLIGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEGLGSPDNLHPMQAAFIKHDGFQCGYCTSGQICSSVAVLKEIQDGIPSHVTVDLVSAPETTADEIRERMSGNICRCGAYANILAAIEDAAGEIKS
1	MUSTER	1ffuD	0.423	0.681	3.352	threading_1	----------------------------------------------------------AKKIITVNVNGKAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLANKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQEN---------------PNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARKLQE
2	SPARKS	1qj2a	0.419	0.677	4.795	threading_2	-----------------------------------------------------------KAHIELTINGHPVEALVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAADGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE---------------NPSPTEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKING
3	PROSPECT2	3hrdD	0.369	0.686	4.272	threading_3	MNK---------------------------------------------------------ITINLNLNGEARSIVTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAEDGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLDK---------------NPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVERCAA
4	PPA-I	1ffuD	0.423	0.681	5.254	threading_4	----------------------------------------------------------AKKIITVNVNGKAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLANKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQEN---------------PNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARKLQE
5	HHPRED-l	1vlb_A	0.416	0.672	4.755	threading_5	-----------------------------------------------------------MIQKVITVNGIEQNLFVDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDGKVVRACVTKMKRVDGAQITTIEGVGQPENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDT---------------NADPSREDVRDWFQKNACRCTGYKPLVDAVMDAAAVIN-
6	HHPRED-g	1t3q_A	0.420	0.686	4.023	threading_6	---------------------------------------------------------SQLMRISATINGKPRVFYVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILIDGAPMRSCLTLAVQAEGCSIETVEGLSQGEKLNALQDSFRRHHALQCGFCTAGMLATARSILAE---------------NPAPSRDEVREVMSGNLCRCTGYETIIDAITDPAVAEAA
7	SP3	1qj2a	0.426	0.677	4.584	threading_7	-----------------------------------------------------------KAHIELTINGHPVEALVEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFAVQANGASITTIEGMAAPGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE---------------NPSPTEAEIRFGIGGNLCRCTGYQNIVKAIQYAAAKING
8	SAM-T99	1ffuD	0.423	0.681	4.344	threading_8	----------------------------------------------------------AKKIITVNVNGKAQEKAVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDGRSVKSCTHLAVQCDGSEVLTVEGLANKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQE---------------NPNPTEAEIRMGMTGNLCRCTGYQNIVKAVQYAARKLQE
9	MUSTER	3hrdD	0.363	0.686	3.302	threading_9	---------------------------------------------------------MNKITINLNLNGEARSIVTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLAGQADESTIITLEGVAEDGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLDK---------------NPDPTDEEITVAMSGNLCRCTGYIKIHAAVRYAVERCAN
10	SPARKS	1fiqa	0.421	0.664	4.382	threading_10	----------------------------------------------------------TADELVFFVNGKKVVENADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKFSANACLAPICTLHHVAVTTVEGIGSKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN---------------QPEPTVEEIEDAFQGNLCRCTGYRPILQGFRTFAK----

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.839 to 1ffuD SCOP code=a.56.1.1	TM-score=0.839 to 1ffuD SCOP code=a.56.1.1	TM-score=0.830 to 1ffuD SCOP code=a.56.1.1	TM-score=0.794 to 1sb3C SCOP code=a.56.1.1	TM-score=0.839 to 1ffuD SCOP code=a.56.1.1