Template-based Modeling Results for YAGQ_ECOLI

Submitted Primary Sequence

>Length 318
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS
CCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS
552311210221231331211221220021012013322200000001032112232101000122020000011000100001101201222321102103222112021102100100011122222110001102322110011123231000112323212322001100212010000020200100010021020100001212220223023310000001112201100110231301000000022211211220242212331021010100010314102000000001000022333332223335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGRDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPVGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAREAKPFYLGALGSYRTHTLRLQKLHELGWSREETTQIRAPVGIFPKARDAHTLALSVLAEVASVRLHQEEDSCLPPSS
1	MUSTER	3on5A	0.223	0.887	1.864	threading_1	----------------------SDIELL----ETLAGTDQPRVATIIHVEGSSYRKEGA--LFQEDGTQVGLLSGGCLETDLTIKAQKVWQEQLPRTVVYDEDDLSWGQGSGCNGTISVLLEPVDLKLHLKRVYDYLCAGKSVFHVKKLSTSGAVLEYIRKIDENEEPLFTHIYSPKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHLIRPDDFVLITHHFQKDQEILHFLLEKELRYIGILGSKERTRRLLQ-------NRKPPDHLYSPVGLSIDAQGPEEIAISIVAQLIQLIRSRKQAS-SPFSY
2	SPARKS	3on5a	0.224	0.884	5.785	threading_2	----------------------SDIELLETL----AGTDQPRVATIIHVEGSSYRKEGA--LFQEDGTQVGLLSGGCLETDLTIKAQKVWQEQLPRTVVYDLSSLSWGQGSGCNGTISVLLEPVDLKQHLKRVYDYLCAGKSVFHVKKLSTSSVYFGEWRKIDENEEPLFTHIYSPKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHFFPDDDFVLITHHFQKDQEILHFLLEKELRYIGILGSKERTRRLLQ-------NRKPPDHLYSPVGLSIDAQGPEEIAISIVAQLIQLIRSRKQASS--PFS
3	PROSPECT2	2we7A	0.288	0.852	3.741	threading_3	GVR----------------------DVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGASV-VAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRY------------GGGILDVFVEPQKTFPQLGAIRDDIEAQRPVAVATVITHPSEVLTYGPDGQRRGEGEVFVSSYAPRPRLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKR------------W
4	PPA-I	2we7A	0.293	0.849	2.478	threading_4	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGA-SVVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRY------------GGGILDVFVEPVKTFPQLGAIRDDIEAQRPVAVATVITHPDVLTYGPDGQRRGEGEVFVSSYAPRP-RLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRW------------
5	HHPRED-l	2we8_A	0.325	0.862	7.825	threading_5	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGASMVVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRYGV-----------GGILDVFVEPVSQFPQLGAIRDDIEAQRPVAVATVITHGRLVVHTDRSRRGEGMEVFVSSYAPRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATQAIDARTVVCVLTHDPKFDVPLLEVALRLPIAYIGAMGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRWG-----------
6	HHPRED-g	2we8_A	0.314	0.862	7.626	threading_6	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGASMVVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRYGV-----------GGILDVFVEPVSQFPQLGAIRDDIEAQRPVAVATVITPGRRLVVHTDQRRGEGMEVFVSSYAPRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTARFARTVVCVLTHDPKFDVPLLEVALRLPIAYIGAMGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRWG-----------
7	SP3	3on5a	0.214	0.884	5.828	threading_7	----------------------SDIELLETL----AGTDQPRVATIIHVEGSSYRKEGA--LFQEDGTQVGLLSGGCLETDLTIKAQKVWQEQLPRTVVYDLSSLSWGQGSGCNGTISVLLEPVDLRQHLKRVYDYLCAGKSVFHVKKLSTSGHPVEWIRKIDENEEPLFTHIYSPKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQCEKHLIRPDDFVLITHHFQKDQEILHFLLEKELRYIGILGSKERTRRLLQNR-------KPPDHLYSPVGLSIDAQGPEEIAISIVAQLIQLIRSRKQAS--SPFS
8	SAM-T99	2we7A	0.312	0.846	5.918	threading_8	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGAS-VVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRYG------------GGILDVFVEPVSQKTQLGAIRDDIEAQRPVAVATVIRGLLAAGRSEVLTYGGEGEVFVSSYAPRPRL-VFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTARFPRTVVCVLTHDPKFDVPLLEVALRLPIAYIGA-GSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRW------------
9	MUSTER	2we7A	0.293	0.849	1.834	threading_9	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGA-SVVAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRY------------GGGILDVFVEPVSQFPQLGAIRDDIEAQRPVAVATVITHSEVLTYGPDGQRRGEGEVFVSSYAPRP-RLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRW------------
10	SPARKS	2we7a	0.289	0.849	5.632	threading_10	----------------------GVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGASV-VAPDGTVSGSVSGGCVEGAVYDLATEVVATGTPVLQRY------------GGGILDVFVEPVSQKPQLGAIRDDIEAQRPVAVATVITHPDVLTYGPDGQRRGEGEVFVSSYAPRP-RLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEETAVSIAAEIIAKRW------------

Predicted Tertiary Structure


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TM-score=0.491 to 1krxA SCOP code=c.23.1.1	TM-score=0.484 to 1xheB SCOP code=c.23.1.1	TM-score=0.470 to 1krxA SCOP code=c.23.1.1	TM-score=0.492 to 1vm6B SCOP code=c.2.1.3	TM-score=0.488 to 1xheB SCOP code=c.23.1.1