Template-based Modeling Results for YAGL_ECOLI

Submitted Primary Sequence

>Length 232
MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG
CCCEEEEEHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG
5512000110111022110000000100001002001111101010000000013433222211010121250312221001121324422231410220022313431000001010112203101200210242401000122123132212000000012122111201321222124244421243223132101203423121220043030101002211221223
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRGKILLYQLKYRWQSLSIFGCFLCKMTLFRYQKIIYDTGVHQMRSFFYTICSSEQQESITDHHSLAEICQKFNILPEHVVIEQVDIKEVVSEQRLLRQLIHHEMNRQDTLVIPDLSCLGRTVEDLQNILFFCLQKEMFIYSYHPASRIEPSAESCLSFLIARQDTIDIHNLKSTKSRYRHVKKKLGRKEGSKYRRDITILKKGGFTQAEIAKKLSISLSTVKRHWNNGIIG
1	MUSTER	1gdtA	0.173	0.772	2.504	threading_1	-------------------------------------------MRLFGYARVSTSQQSLDIQVRALKDAG----VKANRIFTDKASGSS--SDRKGLDLLRMK-VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEGVVFGRKRKID-RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN--
2	SPARKS	1gdta	0.173	0.772	3.468	threading_2	-------------------------------------------MRLFGYARVSTS--QQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMK-VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID-RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN--
3	PROSPECT2	1gdta	0.145	0.772	2.637	threading_3	-------------------------------------------MRLFGYARV--STSQQSLDIQVRALKDAGVKA--NRIFTDKASGSSS--DRKGLDLLRMK-VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERERTNEGRQEAMAKGVVFGRKRKIDRDA-VLNMWQQGLGASHISKTMNIARSTVYKVINES--N
4	PPA-I	1gdtA	0.184	0.772	3.396	threading_4	-------------------------------------------MRLFGYARVSTSQQ--SLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKV-EEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID-RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN--
5	HHPRED-l	1gdt_A	0.162	0.772	4.522	threading_5	-------------------------------------------MRLFGYARVSTSQQSLDIQVRALK----DAGVKANRIFTDKASGSS--SDRKGLDLLRM-KVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERERTNEGRQEAMAKGVVFGRKRKIDRD-AVLNMWQQGLGASHISKTMNIARSTVYKVINESN--
6	HHPRED-g	1gdt_A	0.151	0.772	4.045	threading_6	-------------------------------------------MRLFGY--ARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGSS--SDRKGLDLLRMK-VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERERTNEGRQEAMAKGVVFGRKRKIDRDAVLNM-WQQGLGASHISKTMNIARSTVYKVINESN--
7	SP3	1gdta	0.173	0.772	3.565	threading_7	-------------------------------------------MRLFGYARVST--SQQSLDIQVRALKDAGVKA--NRIFTDKASGSS--SDRKGLDLLRMK-VEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID-RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN--
8	SAM-T99	1gdtA	0.175	0.763	4.795	threading_8	-------------------------------------------MRLFGYARVSTSQQSLDIQVRALKD----AGVKANRIFTDKASGS--SSDR-KGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKR-KIDRDAVLNMWQQGLGASHISKTMNIARSTVYKVINE----
9	MUSTER	2r0qC	0.158	0.737	2.055	threading_9	--------------------------------------------MIIGYARVSSLDQNLERQLENLKTFG------AEKIFTEK--------NRPILQKALNF-VRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDN--G
10	SPARKS	2r0qc	0.146	0.737	3.079	threading_10	--------------------------------------------MIIGYARVSSL--DQNLERQLENLKTFGA----EKIFTE--------KNRPILQKALNF-VRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIMKDLIIQILAMVRNESKRRQAQGIQVAKEKGVYKGRPLLYSIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDN--G

Predicted Tertiary Structure


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TM-score=0.719 to 1gdtA SCOP code=a.4.1.2	TM-score=0.716 to 1gdtA SCOP code=a.4.1.2	TM-score=0.678 to 1gdtA SCOP code=a.4.1.2	TM-score=0.657 to 1gdtA SCOP code=a.4.1.2	TM-score=0.680 to 1gdtA SCOP code=a.4.1.2