Template-based Modeling Results for YAFV_ECOLI

Submitted Primary Sequence

>Length 256
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCEECCCCCCEEEECCCEEEEEEEEECHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEECCCCCEEECEEEEECCCCCEEEECCCCCCEEEEEEECHHHHHHHHHHCCHHHHCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
5531100000000222212100310130022123210000010010111132002213233002001210440200000000132331000000001220100100010004023132101113220002041010000000001001001202501000000111122120000000000121200000003002223201000000000020100020324322100020012002201430101212131423
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMAALREYREKFPAWQDADEFRLW
1	MUSTER	2e11A	0.478	0.996	3.795	threading_1	MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIRE-QEQVVTTTISAAALAEHRARFPAMLDGDSFVLG
2	SPARKS	3p8ka	0.321	0.973	5.678	threading_2	RGSHKVQIYQLPIVFGDSSKNETQITQWFEKNAEVDVVVLPE-WNNGYDLEHLNEKADLGQSFSFIKHLAEKYKVDIAGSVSNIRNNQIFNTAFSVNKSGLINEYDKVHLVPL-REHEFLTAGEYVAFQLSDGTYVTQLICYDLRFPELLRYPAGAKIAFYVAQWP-SRLQHWHSLLKARAIENN-FVIGTNSTGFDG-NTEYAGHSIVINPNGDLVGELNES-ADILTVDLNLNEVEQQRENIPVFKSIK-LDLY
3	PROSPECT2	2e11A	0.475	0.996	5.001	threading_3	MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEMDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQE-QVVTTTISAAALAEHRARFPAMLDGDSFVLG
4	PPA-I	2e11A	0.475	0.996	6.649	threading_4	MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQ-EQVVTTTISAAALAEHRARFPAMLDGDSFVLG
5	HHPRED-l	2e11_A	0.480	0.992	4.310	threading_5	MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLGQSDLVILPETFTSGFSNEAIDKEDMDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRFDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIR-EQEQVVTTTISAAALAEHRARFPAMLDGDSFVL-
6	HHPRED-g	1ems_A	0.238	0.984	3.586	threading_6	MATHFIAVCQMTS-DNDLEKNFQAAKNMIERAGKCEMVFLPECFDFIGLNKNEAMAT-DCEYMEKYRELARKHNILSLGGLHHKDAAHPWNTHLIIDSDGVRAEYNKLHLFDLEMESFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWKRGAQLLSFPSAFTNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVVAQCSER-VDMCFAEIDLSYVDTLREMQPVFSHRRS-DLY
7	SP3	3p8ka	0.321	0.973	5.884	threading_7	RGSHKVQIYQLPIVFGDSSKNETQITQWFEKNAEVDVVVLPE-WNNGYDLEHLNEKADLGQSFSFIKHLAEKYKVDIAGSVSNIRNNQIFNTAFSVNKSGLINEYDKVHLVPL-REHEFLTAGEYVAFQLSDGTYVTQLICYDLRFPELLRYPAGAKIAFYVAQWP-SRLQHWHSLLKARAIENN-FVIGTNSTGFDG-NTEYAGHSIVINPNGDLVGELNES-ADILTVDLNLNEVEQQRENIPVFKSIK-LDLY
8	SAM-T99	2w1vA	0.206	0.988	4.469	threading_8	MSTFRLALIQLQV-SSIKSDNLTRACSLVREAQGANIVSLPECFNSPYGTTPDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEEAGKLYNTCSVFGPDGLLVKHRKIHLFDIFQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYRGCQLLVYPGAFNLTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG-TEETILYSDIDLKKLAEIRQQIPILKQKRADLY-
9	MUSTER	2w1vA	0.221	0.988	3.512	threading_9	MSTFRLALIQLQVS-SIKSDNLTRACSLVREAAGANIVSLPECFNSPYGTTYFPDYAEPGESTQKLSEVAKESSYLIGGSIPEEDAGKLYNTCSVFGPDGLLVKHRKIHLFDIDQESKTLSPGDSFSTFDTPYCKVGLGICYDMRFAELAQIYRGCQLLVYPGAFNLTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG-TEETILYSDIDLKKLAEIRQQIPILKQKRA-DLY
10	SPARKS	2e11a	0.475	0.996	5.075	threading_10	MHDLRISLVQGSTRWHDPAGNRDYYGALLEPLAQSDLVILPETFTSGFSNEAIDKAEDDGPTVAWIRTQAARLGAAITGSVQLRTEHGVFNRLLWATPDGALQYYDKRHLFRFGNEHLRYAAGRERLCVEWKGWRINPQVCYDLRFPVFCRNRLDFDLQLFVANWPSARAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQPQVEIREQ-EQVVTTTISAAALAEHRARFPAMLDGDSFVLG

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.881 to 1f89A SCOP code=d.160.1.1	TM-score=0.881 to 1f89A SCOP code=d.160.1.1	TM-score=0.883 to 1j31A SCOP code=d.160.1.2	TM-score=0.880 to 1f89A SCOP code=d.160.1.1	TM-score=0.881 to 1f89A SCOP code=d.160.1.1