Template-based Modeling Results for YAFL_ECOLI

Submitted Primary Sequence

>Length 249
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
CCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCHHHHHHHEEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
552321211100000100111211010111312122112221321131133122224322222231323023113321231043223213132322344232223333222233223102100220032112100111221331000000000001311304012012101223322202232033000000102143200000000020100101422320200201221012100001101344334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLPSIPSFVLSGLLLICLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESKRALRQHNREQIKQHPEWFPAPLKASDRRWQALAENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDKGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRISRLAEPFWQDHFLGARRILTEETIL
1	MUSTER	2k1gA	0.297	0.514	2.237	threading_1	-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQE--MGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSS-GVIISSMNEPYWKKRYNEARRVLSRS--L
2	SPARKS	2jyxa	0.295	0.518	3.309	threading_2	-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTGR--HVGIYIGNNQFVHAS-TSSGVIISSMNEPYWKKRYNEARRVLSRSLE-
3	PROSPECT2	3pbiA	0.257	0.735	3.065	threading_3	GTLPALVS--------AGAPGDPLAVANASLQATAQATQTTLDLGRQFLGG---------------------------------------------LGINLGGPTGASRIPRANARQAVEYVIRRAGSQMGVPYSWGGGSLQGPFDCSGLVRYAFA-GVGVLIPRFSGDQY--NAGRHVPPAEAKRGDLIFY---GPGGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGM---TPFVTRIIEY----
4	PPA-I	2k1gA	0.295	0.518	2.471	threading_4	-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTK-KGIDCSGFVQRTFREQFGLELPRSTYEQQE--MGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSS-GVIISSMNEPYWKKRYNEARRVLSRSLE-
5	HHPRED-l	3h41_A	0.225	0.876	4.755	threading_5	-------------SAFIATLWTADVPSATNPVDLWKWTKS-TLDEKLWLNKLEQEVTPTAILYINPSEK-HKSLEVYNTRLLSEDTISYRVLLPNGQRKNDGTFYRSQN-DIP--TPAADDLINTGK-FLGLPYIWAGTSG-FGFD-SGFTHTIYKS-HGITIPRDSGPQ--SRNGVAVDKEHLQKGDLIFFAHDGKGSVHHVA-YIGDGN-IHSPRAERSVEIIPLNTPGYIEEYAGARRYLP-----
6	HHPRED-g	2hbw_A	0.236	0.815	4.262	threading_6	-------------------------------GEYQCLAALNLYDSPEC-TSLATQAAVGRHLQVTSNQQAAVEVCLCDDYPGWLSLGDLGLLKPATVL-YQAKS-----FSESEIKKLLPIAFTQKA-QQSNYYLWGGTVG-PNYDCSGL-QAAFVS-VGIWLPRDAYQQEAF--TQAITIDELAPGDLVFFGTP--VKATHVGLYLGDGCYIHSSGKADGIGIDILSEQSYYQQLRGAGRVVKSYKPQ
7	SP3	2k1ga	0.287	0.518	2.967	threading_7	-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSSG-VIISSMNEPYWKKRYNEARRVL-SRSLE
8	SAM-T99	2k1gA	0.322	0.486	4.834	threading_8	--------------------------------------------------------------------------------------------------------------------DVKSRIMDQYADWKGVRYRLGGSTK-KGIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTG--RHVGIYIGNNQFVHA-STSSGVIISSMNEPYWKKRYNEARRVL------
9	MUSTER	3pbiA	0.262	0.735	2.122	threading_9	PTLPALVS--------AGAPGDPLAVANASLQATAQATQTTLDLGRQFLGGLG---------------------------------------------INLGGPTGASRIPRANARQAVEYVIRRAGSQMGVPYSWGGGSLQGGFDCSGLVRYAFAGV-GVLIPRFSGDQYN--AGRHVPPAEAKRGDLIFYGP---GGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGMTP---FVTRIIEY----
10	SPARKS	2k1ga	0.295	0.518	3.305	threading_10	-----------------------------------------------------------------------------------------------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKK-GIDCSGFVQRTFREQFGLELPRSTYEQQEM--GKSVSRSNLRTGDLVLFRAGSTG--RHVGIYIGNNQFVHAS-TSSGVIISSMNEPYWKKRYNEARRVLSRSLE-

Predicted Tertiary Structure


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TM-score=0.438 to 2iobB SCOP code=c.30.1.7	TM-score=0.423 to 2im9A SCOP code=d.3.1.13	TM-score=0.442 to 2iobB SCOP code=c.30.1.7	TM-score=0.422 to 2im9A SCOP code=d.3.1.13	TM-score=0.443 to 2iobB SCOP code=c.30.1.7